myRT

myRT report for GCA_002813325.1_ASM281332v1

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Seq: PHUG01000001.1 Janthinobacterium sp. 64 Ga0181133_11, whole genome shotgun sequence (6009385 bp)
Overview 1 RT 1: 3193710-3198882 bp 2 RT 2: 4983615-4998413 bp Neighborhood of RT #1 [3193710, 3198905] PHA02517 InsE RVT_N RVT-GII GIIM HNHc DAGK_IM_like Neighborhood of RT #2 [4983615, 4998415] Arm-DNA-bind_3 AlpA INT_Rci_Hp1_C dnaG RVT-UG10 RVT-UG10 PRK06498 Feature: gene Location: 3193710-3194594 bp Feature: domain Description: PHA02517 Location: 3193779-3194553 bp Feature: domain Description: PHA0251 7 Location: 31 93779-31 94553 bp Feature: gene Location: 3194591-3194890 bp Feature: domain Description: InsE Location: 3194594-3194882 bp Feature: domain Description: InsE Location: 31 94594-31 94882 bp Feature: gene Location: 3195123-3196787 bp Feature: domain Description: RVT_N Location: 3195177-3195414 bp Feature: domain Description: RVT_N Location: 31 951 77-31 9541 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3195465-3196104 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 95465-31 961 04 bp Feature: domain Description: GIIM Note: maturase Location: 3196155-3196386 bp Feature: domain Description: GIIM Note: maturase Location: 31 961 55-31 96386 bp Feature: domain Description: HNHc Note: nucleases Location: 3196593-3196743 bp Feature: domain Description: HNHc Note: nucleases Location: 31 96593-31 96743 bp Feature: gene Location: 3197980-3198246 bp Feature: gene Location: 3198549-3198905 bp Feature: domain Description: DAGK_IM_like Location: 3198573-3198882 bp Feature: domain Description: DAGK_IM_like Location: 31 98573-31 98882 bp Feature: gene Location: 4983615-4984238 bp Feature: domain Description: Arm-DNA-bind_3 Location: 4983639-4983894 bp Feature: domain Description: Arm-DNA-bind_3 Location: 4983639-4983894 bp Feature: gene Location: 4986135-4986440 bp Feature: domain Description: AlpA Location: 4986192-4986372 bp Feature: domain Description: AlpA Location: 49861 92-4986372 bp Feature: gene Location: 4987330-4995372 bp Feature: domain Description: INT_Rci_Hp1_C Location: 4987342-4987534 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 4987342-4987534 bp Feature: domain Description: dnaG Location: 4987723-4988836 bp Feature: domain Description: dnaG Location: 4987723-4988836 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 4989643-4989886 bp Feature: RT Description: RVT-UG1 0 Note: UG1 0 RT Location: 4989643-4989886 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 4990021-4990291 bp Feature: RT Description: RVT-UG1 0 Note: UG1 0 RT Location: 4990021 -4990291 bp Feature: gene Location: 4995558-4995728 bp Feature: gene Location: 4996835-4998415 bp Feature: domain Description: PRK06498 Location: 4996838-4998413 bp Feature: domain Description: PRK06498 Location: 4996838-499841 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DAGK_IM_like (cl00526), Arm-DNA-bind_3 (pfam13356), AlpA (COG3311), INT_Rci_Hp1_C (cd00796)
dnaG (TIGR01391), RVT-UG10, PRK06498 (isocitrate lyase; Provisional)