myRT

myRT report for GCA_002834415.1_ASM283441v1

Download annotations/find similar RTs

Seq: PIUV01000191.1 Escherichia coli strain KCJK6454 NODE_15_length_115703_cov_20.422_ID_29, whole genome shotgun sequence (115703 bp)
Overview 1 RT 1: 112186-115693 bp Neighborhood of RT #1 [112186, 115701] Antirestrict DUF932 RVT-GII Intron_maturas2 HNHc DUF932 Feature: gene Location: 112186-112671 bp Feature: domain Description: Antirestrict Location: 112384-112669 bp Feature: domain Description: Antirestrict Location: 1 1 2384-1 1 2669 bp Feature: gene Location: 112726-113112 bp Feature: domain Description: DUF932 Location: 112732-113077 bp Feature: domain Description: DUF932 Location: 1 1 2732-1 1 3077 bp Feature: gene Location: 113285-115063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113546-114341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 3546-1 1 4341 bp Feature: domain Description: Intron_maturas2 Location: 114467-114692 bp Feature: domain Description: Intron_maturas2 Location: 1 1 4467-1 1 4692 bp Feature: domain Description: HNHc Note: nucleases Location: 114887-115037 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 4887-1 1 5037 bp Feature: gene Location: 115555-115701 bp Feature: domain Description: DUF932 Location: 115576-115693 bp Feature: domain Description: DUF932 Location: 1 1 5576-1 1 5693 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), DUF932 (pfam06067), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: PIUV01000197.1 Escherichia coli strain KCJK6454 NODE_40_length_41147_cov_22.7429_ID_81, whole genome shotgun sequence (41147 bp)
Overview 1 RT 1: 2-3643 bp Neighborhood of RT #1 [2, 3643] RVT-GII Intron_maturas2 HNHc DUF932 Feature: gene Location: 2-169 bp Feature: gene Location: 342-2120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 603-1398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 603-1398 bp Feature: domain Description: Intron_maturas2 Location: 1524-1749 bp Feature: domain Description: Intron_maturas2 Location: 152 4-1749 bp Feature: domain Description: HNHc Note: nucleases Location: 1944-2094 bp Feature: domain Description: HNHc Note: nucleases Location: 1944-2 094 bp Feature: gene Location: 2612-3013 bp Feature: domain Description: DUF932 Location: 2723-3005 bp Feature: domain Description: DUF932 Location: 2 72 3-3005 bp Feature: gene Location: 3233-3643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)