myRT

myRT report for GCA_002835635.1_TS2v1

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Seq: PIYQ01000023.1 Bacillus cereus strain TS2 Bacillus_cereus_TS2_scaffold25408, whole genome shotgun sequence (1475281 bp)
Overview 1 RT 1: 1219007-1224996 bp 2 RT 2: 1437304-1446229 bp 3 RT 3: 1458658-1463705 bp Neighborhood of RT #1 [1219007, 1224996] CcdC B_ant_repeat B_ant_repeat B_ant_repeat RVT-GII HNHc AdoMet_MTases Neighborhood of RT #2 [1437304, 1446408] TraG-D_C Ftsk_gamma Ftsk_gamma RVT_N RVT-GII GIIM nuc_hydro rpsA Neighborhood of RT #3 [1458658, 1464232] NT_KNTase_like RVT-GII HEPN PRK06850 Feature: gene Location: 1219007-1219513 bp Feature: domain Description: CcdC Location: 1219016-1219478 bp Feature: domain Description: CcdC Location: 1 21 901 6-1 21 9478 bp Feature: gene Location: 1219577-1220857 bp Feature: domain Description: B_ant_repeat Location: 1219655-1219766 bp Feature: domain Description: B_ant_repeat Location: 1 21 9655-1 21 9766 bp Feature: domain Description: B_ant_repeat Location: 1220006-1220162 bp Feature: domain Description: B_ant_repeat Location: 1 220006-1 2201 62 bp Feature: domain Description: B_ant_repeat Location: 1220405-1220561 bp Feature: domain Description: B_ant_repeat Location: 1 220405-1 220561 bp Feature: gene Location: 1221559-1223487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1221880-1222615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 221 880-1 22261 5 bp Feature: domain Description: HNHc Note: nucleases Location: 1223206-1223371 bp Feature: domain Description: HNHc Note: nucleases Location: 1 223206-1 223371 bp Feature: gene Location: 1223632-1224753 bp Feature: domain Description: AdoMet_MTases Location: 1223773-1224139 bp Feature: domain Description: AdoMet_MTases Location: 1 223773-1 2241 39 bp Feature: gene Location: 1224769-1224996 bp Feature: gene Location: 1437304-1437774 bp Feature: gene Location: 1437792-1441292 bp Feature: domain Description: TraG-D_C Location: 1439409-1439769 bp Feature: domain Description: TraG-D_C Location: 1 439409-1 439769 bp Feature: domain Description: Ftsk_gamma Location: 1440177-1440354 bp Feature: domain Description: Ftsk_gamma Location: 1 4401 77-1 440354 bp Feature: domain Description: Ftsk_gamma Location: 1440486-1440621 bp Feature: domain Description: Ftsk_gamma Location: 1 440486-1 440621 bp Feature: gene Location: 1441505-1443151 bp Feature: RT Description: RVT_N Location: 1441547-1441784 bp Feature: RT Description: RVT_N Location: 1 441 547-1 441 784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1441838-1442498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 441 838-1 442498 bp Feature: domain Description: GIIM Note: maturase Location: 1442567-1442798 bp Feature: domain Description: GIIM Note: maturase Location: 1 442567-1 442798 bp Feature: gene Location: 1443871-1444842 bp Feature: domain Description: nuc_hydro Location: 1443907-1444813 bp Feature: domain Description: nuc_hydro Location: 1 443907-1 44481 3 bp Feature: gene Location: 1445425-1446408 bp Feature: domain Description: rpsA Location: 1445692-1446229 bp Feature: domain Description: rpsA Location: 1 445692-1 446229 bp Feature: gene Location: 1458658-1459056 bp Feature: domain Description: NT_KNTase_like Location: 1458733-1459033 bp Feature: domain Description: NT_KNTase_like Location: 1 458733-1 459033 bp Feature: gene Location: 1459615-1459818 bp Feature: gene Location: 1459815-1461746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1460136-1460871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4601 36-1 460871 bp Feature: gene Location: 1461892-1462335 bp Feature: domain Description: HEPN Location: 1461946-1462294 bp Feature: domain Description: HEPN Location: 1 461 946-1 462294 bp Feature: gene Location: 1462460-1464232 bp Feature: domain Description: PRK06850 Location: 1462475-1463705 bp Feature: domain Description: PRK06850 Location: 1 462475-1 463705 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CcdC (COG4846), B_ant_repeat (TIGR01451), RVT-GII, HNHc (smart00507), AdoMet_MTases (cl17173), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), RVT_N (pfam13655), GIIM (pfam08388), nuc_hydro (cl00226)
rpsA (TIGR00717), NT_KNTase_like (cd05403), HEPN (smart00748), PRK06850 (hypothetical protein; Provisional)