myRT

myRT report for GCA_002835935.1_ASM283593v1

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Seq: PJCF01000004.1 Paraglaciecola sp. MB-3u-78 contig1, whole genome shotgun sequence (975502 bp) Associated domains: sucC (PRK00696), PRK05678 (succinyl-CoA synthetase subunit alpha; Validated), RVT-GII, GIIM (pfam08388), TonB-Xanth-Caul (TIGR01782), Cas6_I-F (cl09835)

Seq: PJCF01000013.1 Paraglaciecola sp. MB-3u-78 contig10, whole genome shotgun sequence (263166 bp) Associated domains: PRK11409 (YoeB-YefM toxin-antitoxin system antitoxin YefM), RVT-GII, GIIM (pfam08388)

Seq: PJCF01000007.1 Paraglaciecola sp. MB-3u-78 contig11, whole genome shotgun sequence (236242 bp) Associated domains: PEP_exosort (TIGR02595), RVT-GII, GIIM (pfam08388), RVT-UG4

Seq: PJCF01000008.1 Paraglaciecola sp. MB-3u-78 contig12, whole genome shotgun sequence (220372 bp) Associated domains: TnpB_IS66 (pfam05717), DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388)

Seq: PJCF01000009.1 Paraglaciecola sp. MB-3u-78 contig13, whole genome shotgun sequence (167570 bp) Associated domains: RhtB (COG1280), RVT-GII, GIIM (pfam08388)

Seq: PJCF01000010.1 Paraglaciecola sp. MB-3u-78 contig14, whole genome shotgun sequence (148089 bp) Associated domains: KOG3798 (KOG3798, Predicted Zn-dependent hydrolase (beta-lactamase superfamily) ), RVT-UG4, RVT-GII, Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), GIIM (pfam08388), PEP-CTERM

Seq: PJCF01000014.1 Paraglaciecola sp. MB-3u-78 contig16, whole genome shotgun sequence (84748 bp) Associated domains: Zn_Tnp_IS91 (pfam14319), Y2_Tnp (pfam04986), PEP-CTERM, RVT-GII, GIIM (pfam08388), RVT-UG4, integrase_gron (TIGR02249), Zn_Tnp_IS1595 (pfam12760), DDE_Tnp_IS1595 (pfam12762), DUF4062 (pfam13271)

Seq: PJCF01000015.1 Paraglaciecola sp. MB-3u-78 contig17, whole genome shotgun sequence (76092 bp) Associated domains: RVT-UG4

Seq: PJCF01000006.1 Paraglaciecola sp. MB-3u-78 contig2, whole genome shotgun sequence (931288 bp) Associated domains: SprA-related (pfam12118), RVT-GII, GIIM (pfam08388), ParE-like_toxin (pfam15781), ParD_like (pfam11903), HipA (COG3550), HTH_XRE (smart00530), TPR (smart00028), antidote_HigA (TIGR02607), HigB-like_toxin (pfam05015)
Phage_int_SAM_4 (pfam13495)

Seq: PJCF01000005.1 Paraglaciecola sp. MB-3u-78 contig3, whole genome shotgun sequence (687557 bp) Associated domains: RVT-UG4, DAP2 (COG1506), YHS (pfam04945), RVT-GII, GIIM (pfam08388), DUF2914 (pfam11141), Acetyltransf_10 (pfam13673), PBP2_EcHMBS_like (cd13646), COG5421 (Transposase ), sda_mono
BCCT (pfam02028)

Seq: PJCF01000030.1 Paraglaciecola sp. MB-3u-78 contig32, whole genome shotgun sequence (1566 bp) Associated domains: RVT-GII, GIIM (pfam08388)

Seq: PJCF01000034.1 Paraglaciecola sp. MB-3u-78 contig36, whole genome shotgun sequence (1353 bp) Associated domains: RVT-GII, GIIM (pfam08388)

Seq: PJCF01000003.1 Paraglaciecola sp. MB-3u-78 contig4, whole genome shotgun sequence (645613 bp) Associated domains: RVT-GII, GIIM (pfam08388)

Seq: PJCF01000041.1 Paraglaciecola sp. MB-3u-78 contig43, whole genome shotgun sequence (1135 bp) Associated domains: RVT-GII

Seq: PJCF01000045.1 Paraglaciecola sp. MB-3u-78 contig47, whole genome shotgun sequence (991 bp) Associated domains: RVT-UG4

Seq: PJCF01000001.1 Paraglaciecola sp. MB-3u-78 contig5, whole genome shotgun sequence (431772 bp) Associated domains: DpnI_C (pfam17726), PRK11331 (5-methylcytosine-specific restriction enzyme subunit McrB; Provisional), RVT-UG1, RMtype1_S_SonII-TRD2-CR2_like (cd17246), HsdM (COG0286), RVT-UG4, RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050), PLN02478 (alternative oxidase)
PEP-CTERM

Seq: PJCF01000002.1 Paraglaciecola sp. MB-3u-78 contig6, whole genome shotgun sequence (429871 bp) Associated domains: DPM_DPG-synthase_like (cd04179), RVT-GII, GIIM (pfam08388)

Seq: PJCF01000061.1 Paraglaciecola sp. MB-3u-78 contig63, whole genome shotgun sequence (469 bp) Associated domains: RVT-GII, GIIM (pfam08388)

Seq: PJCF01000086.1 Paraglaciecola sp. MB-3u-78 contig7, whole genome shotgun sequence (399382 bp) Associated domains: RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PRK13107 (preprotein translocase subunit SecA; Reviewed), PRK08999 (Nudix family hydrolase), PGDH (TIGR01327)

Seq: PJCF01000087.1 Paraglaciecola sp. MB-3u-78 contig8, whole genome shotgun sequence (282396 bp) Associated domains: RVT-GII, Ntn_CA (cd01936)