myRT

myRT report for GCA_002836795.1_ASM283679v1

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Seq: PJAP01000282.1 Shewanella sp. 11B5 contig24, whole genome shotgun sequence (11524 bp)
Overview 1 RT 1: 6517-10073 bp Neighborhood of RT #1 [6517, 10073] RVT_N RVT-GII GIIM Feature: gene Location: 6517-7389 bp Feature: gene Location: 7493-7648 bp Feature: gene Location: 7660-9291 bp Feature: domain Description: RVT_N Location: 7867-8110 bp Feature: domain Description: RVT_N Location: 7867-81 1 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8155-8782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 55-8782 bp Feature: domain Description: GIIM Note: maturase Location: 8842-9067 bp Feature: domain Description: GIIM Note: maturase Location: 8842-9067 bp Feature: gene Location: 9533-9754 bp Feature: gene Location: 9798-10073 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: PJAP01000904.1 Shewanella sp. 11B5 contig488, whole genome shotgun sequence (3231 bp)
Overview 1 RT 1: 3-2671 bp Neighborhood of RT #1 [3, 2703] RVT-GII GIIM DUF3792 Feature: gene Location: 3-260 bp Feature: gene Location: 346-1692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 628-1246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 8-12 46 bp Feature: domain Description: GIIM Note: maturase Location: 1294-1498 bp Feature: domain Description: GIIM Note: maturase Location: 12 94-1498 bp Feature: gene Location: 1814-2086 bp Feature: gene Location: 2329-2703 bp Feature: domain Description: DUF3792 Location: 2344-2671 bp Feature: domain Description: DUF3792 Location: 2 344-2 671 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF3792 (pfam12670)

Seq: PJAP01000663.1 Shewanella sp. 11B5 contig733, whole genome shotgun sequence (2109 bp)
Overview 1 RT 1: 1-148 bp Neighborhood of RT #1 [1, 2106] RVT-UG5 Feature: gene Location: 1-2106 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 4-148 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 4-148 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5