myRT

myRT report for GCA_002837615.1_ASM283761v1

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Seq: PJDK01000021.1 Klebsiella sp. X1-16S-Nf21 NODE_21_length_81486_cov_22.297804, whole genome shotgun sequence (81486 bp)
Overview 1 RT 1: 68058-71838 bp Neighborhood of RT #1 [68058, 71903] PHA02517 RVT-GII GIIM RVT-GII PHA02517 Feature: gene Location: 68058-68594 bp Feature: gene Location: 68732-69148 bp Feature: domain Description: PHA02517 Location: 68735-69125 bp Feature: domain Description: PHA0251 7 Location: 68735-691 25 bp Feature: gene Location: 69271-70446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69274-69928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69274-69928 bp Feature: domain Description: GIIM Note: maturase Location: 70042-70201 bp Feature: domain Description: GIIM Note: maturase Location: 70042-70201 bp Feature: gene Location: 70446-70793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70719-70788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7071 9-70788 bp Feature: gene Location: 70864-71172 bp Feature: gene Location: 71385-71903 bp Feature: domain Description: PHA02517 Location: 71499-71838 bp Feature: domain Description: PHA0251 7 Location: 71 499-71 838 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: PJDK01000029.1 Klebsiella sp. X1-16S-Nf21 NODE_29_length_65329_cov_22.436352, whole genome shotgun sequence (65329 bp)
Overview 1 RT 1: 1272-6116 bp Neighborhood of RT #1 [1272, 6116] Acetyltransf_10 PRK13720 RVT_N RVT-GII PRK09413 PRK09409 RVT-GII GIIM HNHc Feature: gene Location: 1272-1757 bp Feature: domain Description: Acetyltransf_10 Location: 1470-1716 bp Feature: domain Description: Acetyltransf_10 Location: 1470-1716 bp Feature: gene Location: 2128-2418 bp Feature: domain Description: PRK13720 Location: 2131-2254 bp Feature: domain Description: PRK1372 0 Location: 2 131-2 2 54 bp Feature: gene Location: 2838-3749 bp Feature: RT Description: RVT_N Location: 2898-3141 bp Feature: RT Description: RVT_N Location: 2 898-3141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3186-3729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3186-372 9 bp Feature: gene Location: 3787-4191 bp Feature: domain Description: PRK09413 Location: 3820-4171 bp Feature: domain Description: PRK09413 Location: 382 0-4171 bp Feature: gene Location: 4197-5012 bp Feature: domain Description: PRK09409 Location: 4206-4989 bp Feature: domain Description: PRK09409 Location: 42 06-4989 bp Feature: gene Location: 5015-5464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5051-5144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5051-5144 bp Feature: domain Description: GIIM Note: maturase Location: 5198-5429 bp Feature: domain Description: GIIM Note: maturase Location: 5198-542 9 bp Feature: gene Location: 5513-5827 bp Feature: domain Description: HNHc Note: nucleases Location: 5642-5804 bp Feature: domain Description: HNHc Note: nucleases Location: 5642 -5804 bp Feature: gene Location: 5988-6116 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_10 (pfam13673), PRK13720 (modulator of post-segregation killing protein; Provisional), RVT_N (pfam13655), RVT-GII, PRK09413 (IS2 repressor TnpA; Reviewed), PRK09409 (IS2 transposase TnpB; Reviewed), GIIM (pfam08388), HNHc (smart00507)

Seq: PJDK01000044.1 Klebsiella sp. X1-16S-Nf21 NODE_44_length_48884_cov_14.384642, whole genome shotgun sequence (48884 bp)
Overview 1 RT 1: 10092-15545 bp Neighborhood of RT #1 [10092, 15556] umuC PRK09951 RVT_N RVT-GII GIIM PRK09951 Feature: gene Location: 10092-11357 bp Feature: domain Description: umuC Location: 10095-11355 bp Feature: domain Description: umuC Location: 10095-113 55 bp Feature: gene Location: 12710-13138 bp Feature: domain Description: PRK09951 Location: 12782-13127 bp Feature: domain Description: PRK09951 Location: 12782-13 127 bp Feature: gene Location: 13154-14647 bp Feature: RT Description: RVT_N Location: 13199-13442 bp Feature: RT Description: RVT_N Location: 13 199-13 442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13487-14135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 487-1413 5 bp Feature: domain Description: GIIM Note: maturase Location: 14195-14423 bp Feature: domain Description: GIIM Note: maturase Location: 14195-14423 bp Feature: gene Location: 14930-15163 bp Feature: gene Location: 15218-15556 bp Feature: domain Description: PRK09951 Location: 15221-15545 bp Feature: domain Description: PRK09951 Location: 15221-15545 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK09951 (hypothetical protein; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)