myRT

myRT report for GCA_002841055.1_ASM284105v1

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Seq: PHDV01000062.1 Candidatus Atribacteria bacterium HGW-Atribacteria-1 bjp_ig2157_scaffold_1169, whole genome shotgun sequence (10432 bp)
Overview 1 RT 1: 828-4774 bp Neighborhood of RT #1 [828, 4774] CrtC PRK06182 RVT-GII Feature: gene Location: 828-1931 bp Feature: domain Description: CrtC Location: 1023-1467 bp Feature: domain Description: CrtC Location: 1 023-1 467 bp Feature: gene Location: 2087-2926 bp Feature: domain Description: PRK06182 Location: 2099-2897 bp Feature: domain Description: PRK061 82 Location: 2099-2897 bp Feature: gene Location: 3044-4144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3092-3773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3092-3773 bp Feature: gene Location: 4194-4448 bp Feature: gene Location: 4613-4774 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CrtC (pfam07143), PRK06182 (short chain dehydrogenase; Validated), RVT-GII

Seq: PHDV01000073.1 Candidatus Atribacteria bacterium HGW-Atribacteria-1 bjp_ig2157_scaffold_1344, whole genome shotgun sequence (9403 bp)
Overview 1 RT 1: 1301-5961 bp Neighborhood of RT #1 [1301, 9110] DUF3387 DUF262 COG3472 COG4951 RVT-UNC Feature: gene Location: 1301-1621 bp Feature: domain Description: DUF3387 Location: 1307-1448 bp Feature: domain Description: DUF3387 Location: 1307-1448 bp Feature: gene Location: 2005-3711 bp Feature: domain Description: DUF262 Location: 2086-2707 bp Feature: domain Description: DUF2 62 Location: 2 086-2 707 bp Feature: domain Description: COG3472 Location: 2866-3682 bp Feature: domain Description: COG3472 Location: 2 866-3682 bp Feature: gene Location: 3981-9110 bp Feature: domain Description: COG4951 Location: 4089-4716 bp Feature: domain Description: COG4951 Location: 4089-4716 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 5400-5961 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 5400-5961 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3387 (pfam11867), DUF262 (pfam03235), COG3472 (Uncharacterized protein ), COG4951 (Uncharacterized protein ), RVT-UG25/RVT-UG10/RVT-CRISPR/RVT-GII(RVT-UNC)

Seq: PHDV01000474.1 Candidatus Atribacteria bacterium HGW-Atribacteria-1 bjp_ig2157_scaffold_15830, whole genome shotgun sequence (3385 bp)
Overview 1 RT 1: 288-3383 bp Neighborhood of RT #1 [288, 3382] RVT-GII KOG1005 cmk PRK00087 Feature: gene Location: 288-1397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 645-1008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 645-1008 bp Feature: domain Description: KOG1005 Location: 1008-1140 bp Feature: domain Description: KOG1005 Location: 1008-1140 bp Feature: gene Location: 2065-2790 bp Feature: domain Description: cmk Location: 2077-2746 bp Feature: domain Description: cmk Location: 2077-2746 bp Feature: gene Location: 2771-3382 bp Feature: domain Description: PRK00087 Location: 2774-3383 bp Feature: domain Description: PRK00087 Location: 2774-3 3 83 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, KOG1005 (KOG1005, Telomerase catalytic subunit/reverse transcriptase TERT ), cmk (TIGR00017), PRK00087 (bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1)

Seq: PHDV01000135.1 Candidatus Atribacteria bacterium HGW-Atribacteria-1 bjp_ig2157_scaffold_2008, whole genome shotgun sequence (9121 bp)
Overview 1 RT 1: 5815-8539 bp Neighborhood of RT #1 [5815, 8625] EDH_00030 RVT-GII GIIM Feature: gene Location: 5815-6789 bp Feature: domain Description: EDH_00030 Location: 5827-6706 bp Feature: domain Description: EDH_00030 Location: 5827-6706 bp Feature: gene Location: 6832-7299 bp Feature: gene Location: 7348-8625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7603-8266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7603-8266 bp Feature: domain Description: GIIM Note: maturase Location: 8359-8539 bp Feature: domain Description: GIIM Note: maturase Location: 8359-8539 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EDH_00030 (TIGR04180), RVT-GII, GIIM (pfam08388)