myRT

myRT report for GCA_002841405.1_ASM284140v1

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Seq: PGZR01000048.1 Firmicutes bacterium HGW-Firmicutes-4 bjp_ig2103_scaffold_1368, whole genome shotgun sequence (31531 bp)
Overview 1 RT 1: 807-5963 bp Neighborhood of RT #1 [807, 7063] YdhG YdhG DUF3788 RVT-Retrons HsdR Feature: gene Location: 807-1643 bp Feature: domain Description: YdhG Location: 837-1182 bp Feature: domain Description: YdhG Location: 837-1 1 82 bp Feature: domain Description: YdhG Location: 1212-1569 bp Feature: domain Description: YdhG Location: 1 21 2-1 569 bp Feature: gene Location: 1970-2395 bp Feature: domain Description: DUF3788 Location: 2003-2381 bp Feature: domain Description: DUF3788 Location: 2003-2381 bp Feature: gene Location: 2945-4171 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3104-3665 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31 04-3665 bp Feature: gene Location: 4342-5217 bp Feature: gene Location: 5531-7063 bp Feature: domain Description: HsdR Location: 5543-5963 bp Feature: domain Description: HsdR Location: 5543-5963 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YdhG (COG5646), DUF3788 (pfam12663), RVT-Retrons, HsdR (COG4096)

Seq: PGZR01000030.1 Firmicutes bacterium HGW-Firmicutes-4 bjp_ig2103_scaffold_929, whole genome shotgun sequence (35303 bp)
Overview 1 RT 1: 9973-15131 bp Neighborhood of RT #1 [9973, 15196] RVT-CRISPR Cas_Cas1 Cas2_I_II_III Feature: gene Location: 9973-10830 bp Feature: gene Location: 10876-11505 bp Feature: gene Location: 12460-13953 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 12664-13204 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 12 664-132 04 bp Feature: gene Location: 13957-14904 bp Feature: domain Description: Cas_Cas1 Location: 13969-14809 bp Feature: domain Description: Cas_Cas1 Location: 13969-14809 bp Feature: gene Location: 14888-15196 bp Feature: domain Description: Cas2_I_II_III Location: 14918-15131 bp Feature: domain Description: Cas2 _I_II_III Location: 14918-15131 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas_Cas1 (pfam01867), Cas2_I_II_III (cl11442)