myRT

myRT report for GCA_002841575.1_ASM284157v1

Download annotations/find similar RTs

Seq: PHAC01000250.1 Firmicutes bacterium HGW-Firmicutes-13 bjp_ig2158_scaffold_15046, whole genome shotgun sequence (2389 bp)
Overview 1 RT 1: 418-2346 bp Neighborhood of RT #1 [418, 2387] tcm_partner xerC RVT-GII Feature: gene Location: 418-774 bp Feature: domain Description: tcm_partner Location: 451-736 bp Feature: domain Description: tcm_partner Location: 451 -736 bp Feature: gene Location: 969-1937 bp Feature: domain Description: xerC Location: 984-1860 bp Feature: domain Description: xerC Location: 984-1 860 bp Feature: gene Location: 2184-2387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2208-2346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2208-2346 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, tcm_partner (TIGR04474), xerC (PRK01287)

Seq: PHAC01000006.1 Firmicutes bacterium HGW-Firmicutes-13 bjp_ig2158_scaffold_2352, whole genome shotgun sequence (11417 bp)
Overview 1 RT 1: 73-2576 bp Neighborhood of RT #1 [73, 2581] RVT-GII COG5421 group_II_RT_mat Feature: gene Location: 73-243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76-229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76-2 2 9 bp Feature: gene Location: 583-2265 bp Feature: domain Description: COG5421 Location: 814-2155 bp Feature: domain Description: COG542 1 Location: 814-2 155 bp Feature: gene Location: 2342-2581 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2375-2576 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2 375-2 576 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), COG5421 (Transposase ), RVT-GII