myRT

myRT report for GCA_002842085.1_ASM284208v1

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Seq: PHCA01000099.1 Chloroflexi bacterium HGW-Chloroflexi-1 bjp_ig2158_scaffold_4279, whole genome shotgun sequence (37994 bp)
Overview 1 RT 1: 18288-22777 bp Neighborhood of RT #1 [18288, 22800] PRK09601 rpsF RVT-GII Intron_maturas2 HNHc ssb rpsR Feature: gene Location: 18288-19265 bp Feature: domain Description: PRK09601 Location: 18291-19263 bp Feature: domain Description: PRK09601 Location: 1 8291 -1 9263 bp Feature: gene Location: 19440-19742 bp Feature: domain Description: rpsF Location: 19455-19737 bp Feature: domain Description: rpsF Location: 1 9455-1 9737 bp Feature: gene Location: 20225-22024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20486-21284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20486-21 284 bp Feature: domain Description: Intron_maturas2 Location: 21383-21626 bp Feature: domain Description: Intron_maturas2 Location: 21 383-21 626 bp Feature: domain Description: HNHc Note: nucleases Location: 21809-21971 bp Feature: domain Description: HNHc Note: nucleases Location: 21 809-21 971 bp Feature: gene Location: 22097-22390 bp Feature: domain Description: ssb Location: 22100-22340 bp Feature: domain Description: ssb Location: 221 00-22340 bp Feature: gene Location: 22498-22800 bp Feature: domain Description: rpsR Location: 22555-22777 bp Feature: domain Description: rpsR Location: 22555-22777 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09601 (redox-regulated ATPase YchF), rpsF (PRK14074), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), ssb (TIGR00621), rpsR (PRK00391)

Seq: PHCA01000226.1 Chloroflexi bacterium HGW-Chloroflexi-1 bjp_ig2158_scaffold_9376, whole genome shotgun sequence (4480 bp)
Overview 1 RT 1: 442-4466 bp Neighborhood of RT #1 [442, 4477] Cas2_I_II_III RVT-CRISPR Csx1_III-U cas_cas6 Feature: gene Location: 442-729 bp Feature: domain Description: Cas2_I_II_III Location: 466-691 bp Feature: domain Description: Cas2 _I_II_III Location: 466-691 bp Feature: gene Location: 957-1382 bp Feature: gene Location: 1889-2788 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2129-2723 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2 12 9-2 72 3 bp Feature: gene Location: 2900-3583 bp Feature: domain Description: Csx1_III-U Location: 3242-3524 bp Feature: domain Description: Csx1_III-U Location: 32 42 -352 4 bp Feature: gene Location: 3668-4477 bp Feature: domain Description: cas_cas6 Location: 3797-4466 bp Feature: domain Description: cas_cas6 Location: 3797-4466 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, Csx1_III-U (cl21570), cas_cas6 (TIGR01877)