myRT

myRT report for GCA_002842215.1_ASM284221v1

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Seq: PHCC01000009.1 Betaproteobacteria bacterium HGW-Betaproteobacteria-9 08E140C01_scaffold_150, whole genome shotgun sequence (168569 bp)
Overview 1 RT 1: 57624-65560 bp Neighborhood of RT #1 [57624, 65655] DLP_2 DLP_2 PRK01103 RVT_N RVT-GII GIIM HNHc PEP_TPR_lipo TPR TPR_14 TPR TPR LolB Feature: gene Location: 57624-59822 bp Feature: domain Description: DLP_2 Location: 58050-58194 bp Feature: domain Description: DLP_2 Location: 58050-581 94 bp Feature: domain Description: DLP_2 Location: 58461-58911 bp Feature: domain Description: DLP_2 Location: 58461 -5891 1 bp Feature: gene Location: 59605-60420 bp Feature: domain Description: PRK01103 Location: 59608-60415 bp Feature: domain Description: PRK01 1 03 Location: 59608-6041 5 bp Feature: gene Location: 61480-63186 bp Feature: RT Description: RVT_N Location: 61537-61780 bp Feature: RT Description: RVT_N Location: 61 537-61 780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61825-62473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 825-62473 bp Feature: domain Description: GIIM Note: maturase Location: 62524-62758 bp Feature: domain Description: GIIM Note: maturase Location: 62524-62758 bp Feature: domain Description: HNHc Note: nucleases Location: 62968-63139 bp Feature: domain Description: HNHc Note: nucleases Location: 62968-631 39 bp Feature: gene Location: 63209-65146 bp Feature: domain Description: PEP_TPR_lipo Location: 63896-64139 bp Feature: domain Description: PEP_TPR_lipo Location: 63896-641 39 bp Feature: domain Description: TPR Location: 64172-64466 bp Feature: domain Description: TPR Location: 641 72-64466 bp Feature: domain Description: TPR_14 Location: 64493-64604 bp Feature: domain Description: TPR_1 4 Location: 64493-64604 bp Feature: domain Description: TPR Location: 64610-64829 bp Feature: domain Description: TPR Location: 6461 0-64829 bp Feature: domain Description: TPR Location: 64847-65084 bp Feature: domain Description: TPR Location: 64847-65084 bp Feature: gene Location: 65143-65655 bp Feature: domain Description: LolB Location: 65272-65560 bp Feature: domain Description: LolB Location: 65272-65560 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DLP_2 (cd09912), PRK01103 (bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PEP_TPR_lipo (TIGR02917), TPR (smart00028), TPR_14 (pfam13428), LolB (pfam03550)