myRT

myRT report for GCA_002842465.1_ASM284246v1

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Seq: PHDA01000004.1 Bacteroidetes bacterium HGW-Bacteroidetes-7 bjp_ig2103_scaffold_110, whole genome shotgun sequence (111170 bp)
Overview 1 RT 1: 8922-12126 bp Neighborhood of RT #1 [8922, 12215] RVT-DGRs DUF3164 PRK05590 Feature: gene Location: 8922-9404 bp Feature: gene Location: 9425-9796 bp Feature: gene Location: 10006-11292 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 10216-10801 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 021 6-1 0801 bp Feature: gene Location: 11325-11969 bp Feature: domain Description: DUF3164 Location: 11430-11961 bp Feature: domain Description: DUF31 64 Location: 1 1 430-1 1 961 bp Feature: gene Location: 11997-12215 bp Feature: domain Description: PRK05590 Location: 12036-12126 bp Feature: domain Description: PRK05590 Location: 1 2036-1 21 26 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, DUF3164 (pfam11363), PRK05590 (hypothetical protein; Provisional)

Seq: PHDA01000024.1 Bacteroidetes bacterium HGW-Bacteroidetes-7 bjp_ig2103_scaffold_564, whole genome shotgun sequence (38476 bp)
Overview 1 RT 1: 1-4182 bp Neighborhood of RT #1 [1, 4265] Cas6b_N Cas6b_C RVT-Retrons cas1 CRISPR_Cas2 Feature: gene Location: 1-1119 bp Feature: gene Location: 1166-1912 bp Feature: domain Description: Cas6b_N Location: 1328-1520 bp Feature: domain Description: Cas6b_N Location: 132 8-152 0 bp Feature: domain Description: Cas6b_C Location: 1550-1901 bp Feature: domain Description: Cas6b_C Location: 1550-1901 bp Feature: gene Location: 1946-2956 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2069-2633 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 069-2 633 bp Feature: gene Location: 2968-3948 bp Feature: domain Description: cas1 Location: 2977-3943 bp Feature: domain Description: cas1 Location: 2 977-3943 bp Feature: gene Location: 3945-4265 bp Feature: domain Description: CRISPR_Cas2 Location: 3966-4182 bp Feature: domain Description: CRISPR_Cas2 Location: 3966-4182 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas6b_N (pfam17955), Cas6b_C, RVT-Retrons, cas1 (TIGR00287), CRISPR_Cas2 (pfam09827)