myRT

myRT report for GCA_002843485.1_ASM284348v1

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Seq: PJFA01000017.1 Paenibacillus sp. BGI2013 17_125428_19.3995, whole genome shotgun sequence (125428 bp)
Overview 1 RT 1: 33481-38952 bp Neighborhood of RT #1 [33481, 38952] RVT-UG15 Feature: gene Location: 33481-34944 bp Feature: gene Location: 34980-35162 bp Feature: gene Location: 35162-36664 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 35564-35981 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 35564-35981 bp Feature: gene Location: 36818-38398 bp Feature: gene Location: 38767-38952 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG15

Seq: PJFA01000003.1 Paenibacillus sp. BGI2013 3_820134_17.8511, whole genome shotgun sequence (820134 bp)
Overview 1 RT 1: 536-2780 bp 2 RT 2: 815577-819971 bp Neighborhood of RT #1 [536, 2794] RVT-GII GIIM KOG2994 Neighborhood of RT #2 [815577, 820030] GalM fumC_II RVT-GII GIIM Feature: gene Location: 536-1828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 836-1469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 836-1469 bp Feature: domain Description: GIIM Note: maturase Location: 1592-1769 bp Feature: domain Description: GIIM Note: maturase Location: 1592 -1769 bp Feature: gene Location: 1866-2078 bp Feature: gene Location: 2126-2794 bp Feature: domain Description: KOG2994 Location: 2132-2780 bp Feature: domain Description: KOG2 994 Location: 2 132 -2 780 bp Feature: gene Location: 815577-816608 bp Feature: domain Description: GalM Location: 815667-816588 bp Feature: domain Description: GalM Location: 815667-816588 bp Feature: gene Location: 816621-818129 bp Feature: domain Description: fumC_II Location: 816750-818115 bp Feature: domain Description: fumC_II Location: 816750-818115 bp Feature: gene Location: 818738-820030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 819038-819671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 819038-819671 bp Feature: domain Description: GIIM Note: maturase Location: 819794-819971 bp Feature: domain Description: GIIM Note: maturase Location: 819794-819971 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), KOG2994 (KOG2994, Uracil DNA glycosylase ), GalM (COG2017), fumC_II (TIGR00979)