myRT

myRT report for GCA_002845905.1_ASM284590v1

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Seq: CP025090.1 Klebsiella pneumoniae strain KP9 chromosome (5339613 bp)
Overview 1 RT 1: 1850255-1858831 bp 2 RT 2: 1930067-1936183 bp 3 RT 3: 3318071-3324960 bp 4 RT 4: 3746758-3752580 bp Neighborhood of RT #1 [1850255, 1858831] FhlA EAL YncE YncE RVT-GII RVT-GII PRK10597 Neighborhood of RT #2 [1930067, 1936185] DinI RVT-GII RVT-GII PRK10276 umuC Neighborhood of RT #3 [3318071, 3324965] YccC PRK10016 RVT-GII RVT-GII dacD Neighborhood of RT #4 [3746758, 3752580] Phage_holin_8 PHA02515 SGNH_hydrolase RVT-GII Feature: gene Location: 1850255-1852018 bp Feature: domain Description: FhlA Location: 1850324-1850717 bp Feature: domain Description: FhlA Location: 1 850324-1 85071 7 bp Feature: domain Description: EAL Location: 1851260-1851974 bp Feature: domain Description: EAL Location: 1 851 260-1 851 974 bp Feature: gene Location: 1852362-1853723 bp Feature: domain Description: YncE Location: 1852770-1853178 bp Feature: domain Description: YncE Location: 1 852770-1 8531 78 bp Feature: domain Description: YncE Location: 1853247-1853667 bp Feature: domain Description: YncE Location: 1 853247-1 853667 bp Feature: gene Location: 1854721-1856208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1855126-1855816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8551 26-1 85581 6 bp Feature: gene Location: 1856730-1858217 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1857135-1857825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8571 35-1 857825 bp Feature: gene Location: 1858296-1858529 bp Feature: domain Description: PRK10597 Location: 1858299-1858524 bp Feature: domain Description: PRK1 0597 Location: 1 858299-1 858524 bp Feature: gene Location: 1858541-1858831 bp Feature: gene Location: 1930067-1930309 bp Feature: domain Description: DinI Location: 1930118-1930298 bp Feature: domain Description: DinI Location: 1 9301 1 8-1 930298 bp Feature: gene Location: 1930324-1930470 bp Feature: gene Location: 1930923-1932410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1931328-1932018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 931 328-1 93201 8 bp Feature: gene Location: 1932932-1934419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1933337-1934027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 933337-1 934027 bp Feature: gene Location: 1934498-1934917 bp Feature: domain Description: PRK10276 Location: 1934501-1934912 bp Feature: domain Description: PRK1 0276 Location: 1 934501 -1 93491 2 bp Feature: gene Location: 1934920-1936185 bp Feature: domain Description: umuC Location: 1934923-1936183 bp Feature: domain Description: umuC Location: 1 934923-1 9361 83 bp Feature: gene Location: 3318071-3319129 bp Feature: domain Description: YccC Location: 3318077-3319115 bp Feature: domain Description: YccC Location: 331 8077-331 91 1 5 bp Feature: gene Location: 3319228-3319701 bp Feature: domain Description: PRK10016 Location: 3319231-3319690 bp Feature: domain Description: PRK1 001 6 Location: 331 9231 -331 9690 bp Feature: gene Location: 3319783-3321267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3320185-3320875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33201 85-3320875 bp Feature: gene Location: 3321276-3321443 bp Feature: gene Location: 3321792-3323276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3322194-3322884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33221 94-3322884 bp Feature: gene Location: 3323433-3323651 bp Feature: gene Location: 3323796-3324965 bp Feature: domain Description: dacD Location: 3323805-3324960 bp Feature: domain Description: dacD Location: 3323805-3324960 bp Feature: gene Location: 3746758-3747165 bp Feature: domain Description: Phage_holin_8 Location: 3746776-3747136 bp Feature: domain Description: Phage_holin_8 Location: 3746776-37471 36 bp Feature: gene Location: 3747173-3749506 bp Feature: domain Description: PHA02515 Location: 3747185-3747524 bp Feature: domain Description: PHA0251 5 Location: 37471 85-3747524 bp Feature: domain Description: SGNH_hydrolase Location: 3747992-3748571 bp Feature: domain Description: SGNH_hydrolase Location: 3747992-3748571 bp Feature: gene Location: 3750193-3751680 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3750598-3751288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3750598-3751 288 bp Feature: gene Location: 3751777-3752115 bp Feature: gene Location: 3752296-3752580 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FhlA (COG3604), EAL (smart00052), YncE (COG3391), RVT-GII, PRK10597 (DNA damage-inducible protein I; Provisional), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC)
dacD (PRK11397), Phage_holin_8 (pfam16931), PHA02515 (hypothetical protein; Provisional), SGNH_hydrolase (cl01053)