myRT

myRT report for GCA_002846355.1_ASM284635v1

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Seq: PJMT01000001.1 Streptomyces sp. GP55 Ga0070144_11, whole genome shotgun sequence (8876301 bp)
Overview 1 RT 1: 373654-379019 bp 2 RT 2: 6458557-6462417 bp 3 RT 3: 6553630-6563775 bp 4 RT 4: 6660419-6664891 bp Neighborhood of RT #1 [373654, 379019] PRK10605 LZ_Tnp_IS481 HTH_29 rve RVT-GII Intron_maturas2 HNHc padR_acidobact Neighborhood of RT #2 [6458557, 6462644] PTPS NrdG RVT-CRISPR-like YfmG Glyco_tranf_GTA_type Neighborhood of RT #3 [6553630, 6564566] DUF772 DDE_Tnp_1 DDE_Tnp_1_6 TrxB RVT-GII Intron_maturas2 HNHc DUF772 Csb1_I-U DUF3494 Neighborhood of RT #4 [6660419, 6664905] CBS_pair_SF Arm-DNA-bind_4 RVT-GII Intron_maturas2 HNHc rve rve SLC-NCS1sbd_YbbW-like Feature: gene Location: 373654-374076 bp Feature: domain Description: PRK10605 Location: 373690-374041 bp Feature: domain Description: PRK1 0605 Location: 373690-374041 bp Feature: gene Location: 374133-375011 bp Feature: domain Description: LZ_Tnp_IS481 Location: 374199-374439 bp Feature: domain Description: LZ_Tnp_IS481 Location: 3741 99-374439 bp Feature: domain Description: HTH_29 Location: 374451-374574 bp Feature: domain Description: HTH_29 Location: 374451 -374574 bp Feature: domain Description: rve Location: 374592-374973 bp Feature: domain Description: rve Location: 374592-374973 bp Feature: gene Location: 375508-377310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 375769-376567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 375769-376567 bp Feature: domain Description: Intron_maturas2 Location: 376705-376936 bp Feature: domain Description: Intron_maturas2 Location: 376705-376936 bp Feature: domain Description: HNHc Note: nucleases Location: 377107-377266 bp Feature: domain Description: HNHc Note: nucleases Location: 3771 07-377266 bp Feature: gene Location: 377671-378024 bp Feature: domain Description: padR_acidobact Location: 377701-377968 bp Feature: domain Description: padR_acidobact Location: 377701 -377968 bp Feature: gene Location: 378021-379019 bp Feature: gene Location: 6458557-6458952 bp Feature: domain Description: PTPS Location: 6458587-6458941 bp Feature: domain Description: PTPS Location: 6458587-6458941 bp Feature: gene Location: 6458949-6459662 bp Feature: domain Description: NrdG Location: 6458994-6459645 bp Feature: domain Description: NrdG Location: 6458994-6459645 bp Feature: gene Location: 6459817-6460599 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 6460042-6460558 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 6460042-6460558 bp Feature: gene Location: 6460613-6461173 bp Feature: domain Description: YfmG Location: 6460769-6461168 bp Feature: domain Description: YfmG Location: 6460769-6461 1 68 bp Feature: gene Location: 6461598-6462644 bp Feature: domain Description: Glyco_tranf_GTA_type Location: 6461751-6462417 bp Feature: domain Description: Glyco_tranf_GTA_type Location: 6461 751 -646241 7 bp Feature: gene Location: 6553630-6555315 bp Feature: domain Description: DUF772 Location: 6553789-6554005 bp Feature: domain Description: DUF772 Location: 6553789-6554005 bp Feature: domain Description: DDE_Tnp_1 Location: 6554551-6554758 bp Feature: domain Description: DDE_Tnp_1 Location: 6554551 -6554758 bp Feature: domain Description: DDE_Tnp_1_6 Location: 6554827-6555205 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 6554827-6555205 bp Feature: gene Location: 6555753-6557279 bp Feature: domain Description: TrxB Location: 6556317-6557196 bp Feature: domain Description: TrxB Location: 655631 7-65571 96 bp Feature: gene Location: 6557174-6558964 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6557438-6558233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6557438-6558233 bp Feature: domain Description: Intron_maturas2 Location: 6558335-6558566 bp Feature: domain Description: Intron_maturas2 Location: 6558335-6558566 bp Feature: domain Description: HNHc Note: nucleases Location: 6558731-6558920 bp Feature: domain Description: HNHc Note: nucleases Location: 6558731 -6558920 bp Feature: gene Location: 6559953-6562664 bp Feature: domain Description: DUF772 Location: 6560112-6560328 bp Feature: domain Description: DUF772 Location: 65601 1 2-6560328 bp Feature: domain Description: Csb1_I-U Location: 6561966-6562107 bp Feature: domain Description: Csb1 _I-U Location: 6561 966-65621 07 bp Feature: gene Location: 6563151-6564566 bp Feature: domain Description: DUF3494 Location: 6563211-6563775 bp Feature: domain Description: DUF3494 Location: 656321 1 -6563775 bp Feature: gene Location: 6660419-6660799 bp Feature: domain Description: CBS_pair_SF Location: 6660494-6660794 bp Feature: domain Description: CBS_pair_SF Location: 6660494-6660794 bp Feature: gene Location: 6661012-6661545 bp Feature: domain Description: Arm-DNA-bind_4 Location: 6661129-6661237 bp Feature: domain Description: Arm-DNA-bind_4 Location: 6661 1 29-6661 237 bp Feature: gene Location: 6662033-6663835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6662294-6663092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6662294-6663092 bp Feature: domain Description: Intron_maturas2 Location: 6663230-6663461 bp Feature: domain Description: Intron_maturas2 Location: 6663230-6663461 bp Feature: domain Description: HNHc Note: nucleases Location: 6663632-6663791 bp Feature: domain Description: HNHc Note: nucleases Location: 6663632-6663791 bp Feature: gene Location: 6664332-6664664 bp Feature: domain Description: rve Location: 6664419-6664485 bp Feature: domain Description: rve Location: 666441 9-6664485 bp Feature: domain Description: rve Location: 6664578-6664626 bp Feature: domain Description: rve Location: 6664578-6664626 bp Feature: gene Location: 6664696-6664905 bp Feature: domain Description: SLC-NCS1sbd_YbbW-like Location: 6664753-6664891 bp Feature: domain Description: SLC-NCS1 sbd_YbbW-like Location: 6664753-6664891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10605 (N-ethylmaleimide reductase; Provisional), LZ_Tnp_IS481 (pfam13011), HTH_29 (pfam13551), rve (pfam00665), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), padR_acidobact (TIGR03433), PTPS (pfam01242), NrdG (TIGR02491)
RVT-CRISPR, YfmG (COG1262), Glyco_tranf_GTA_type (cl11394), DUF772 (pfam05598), DDE_Tnp_1 (pfam01609), DDE_Tnp_1_6 (pfam13751), TrxB (COG0492), Csb1_I-U (cl09834), DUF3494 (pfam11999), CBS_pair_SF (cl15354)
Arm-DNA-bind_4 (pfam14657), SLC-NCS1sbd_YbbW-like (cd11485)