myRT

myRT report for GCA_002847165.1_ASM284716v1

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Seq: PJUR01000020.1 Staphylococcus pseudintermedius strain 113N SP113_S4_L001_Assembly_Contig_20, whole genome shotgun sequence (35063 bp)
Overview 1 RT 1: 3-1678 bp Neighborhood of RT #1 [3, 1686] RVT-GII TrkA Feature: gene Location: 3-488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 228-483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 228-483 bp Feature: gene Location: 590-748 bp Feature: gene Location: 1027-1686 bp Feature: domain Description: TrkA Location: 1036-1678 bp Feature: domain Description: TrkA Location: 1 036-1 678 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, TrkA (COG0569)

Seq: PJUR01000025.1 Staphylococcus pseudintermedius strain 113N SP113_S4_L001_Assembly_Contig_25, whole genome shotgun sequence (31582 bp)
Overview 1 RT 1: 28514-31416 bp Neighborhood of RT #1 [28514, 31580] Stap_Strp_toxin Stap_Strp_tox_C eMpr RVT-GII GIIM Feature: gene Location: 28514-29323 bp Feature: domain Description: Stap_Strp_toxin Location: 28688-28961 bp Feature: domain Description: Stap_Strp_toxin Location: 2 8688-2 8961 bp Feature: domain Description: Stap_Strp_tox_C Location: 29000-29312 bp Feature: domain Description: Stap_Strp_tox_C Location: 2 9000-2 9312 bp Feature: gene Location: 29855-30697 bp Feature: domain Description: eMpr Location: 30038-30569 bp Feature: domain Description: eMpr Location: 30038-30569 bp Feature: gene Location: 31017-31580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31020-31125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3102 0-3112 5 bp Feature: domain Description: GIIM Note: maturase Location: 31185-31416 bp Feature: domain Description: GIIM Note: maturase Location: 31185-31416 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Stap_Strp_toxin (pfam01123), Stap_Strp_tox_C (pfam02876), eMpr (COG3591), RVT-GII, GIIM (pfam08388)

Seq: PJUR01000070.1 Staphylococcus pseudintermedius strain 113N SP113_S4_L001_Assembly_Contig_70, whole genome shotgun sequence (741 bp)
Overview 1 RT 1: 56-735 bp Neighborhood of RT #1 [56, 740] RVT-GII Feature: gene Location: 56-250 bp Feature: gene Location: 180-740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 183-735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 183 -73 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PJUR01000071.1 Staphylococcus pseudintermedius strain 113N SP113_S4_L001_Assembly_Contig_71, whole genome shotgun sequence (617 bp)
Overview 1 RT 1: 1-478 bp Neighborhood of RT #1 [1, 615] RVT-GII GIIM Feature: gene Location: 1-615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10-187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10-187 bp Feature: domain Description: GIIM Note: maturase Location: 247-478 bp Feature: domain Description: GIIM Note: maturase Location: 24 7-4 78 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PJUR01000076.1 Staphylococcus pseudintermedius strain 113N SP113_S4_L001_Assembly_Contig_76, whole genome shotgun sequence (391 bp)
Overview 1 RT 1: 2-338 bp Neighborhood of RT #1 [2, 388] RVT-GII Feature: gene Location: 2-388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 -338 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PJUR01000081.1 Staphylococcus pseudintermedius strain 113N SP113_S4_L001_Assembly_Contig_82, whole genome shotgun sequence (277 bp)
Overview 1 RT 1: 3-273 bp Neighborhood of RT #1 [3, 275] RVT-GII Feature: gene Location: 3-275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 -273 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PJUR01000084.1 Staphylococcus pseudintermedius strain 113N SP113_S4_L001_Assembly_Contig_86, whole genome shotgun sequence (584 bp)
Overview 1 RT 1: 109-580 bp Neighborhood of RT #1 [109, 582] RVT-GII Feature: gene Location: 109-582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334-580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334-580 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII