myRT

myRT report for GCA_002847845.1_ASM284784v1

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Seq: PKJD01000116.1 Globicatella sanguinis strain UMB0514 ERR1203656.17957_1_68.116, whole genome shotgun sequence (998 bp)
Overview 1 RT 1: 19-972 bp Neighborhood of RT #1 [19, 995] RVT-GII PRK09183 Feature: gene Location: 19-318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121-259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 -259 bp Feature: gene Location: 429-995 bp Feature: domain Description: PRK09183 Location: 435-972 bp Feature: domain Description: PRK091 83 Location: 435-972 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK09183 (transposase/IS protein; Provisional)

Seq: PKJD01000002.1 Globicatella sanguinis strain UMB0514 ERR1203656.17957_1_68.2, whole genome shotgun sequence (99817 bp)
Overview 1 RT 1: 46-3608 bp Neighborhood of RT #1 [46, 3700] RVT-GII GIIM PRK00549 Halogen_Hydrol Feature: gene Location: 46-1035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76-571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76-571 bp Feature: domain Description: GIIM Note: maturase Location: 631-850 bp Feature: domain Description: GIIM Note: maturase Location: 631-850 bp Feature: gene Location: 1312-2583 bp Feature: domain Description: PRK00549 Location: 1315-2566 bp Feature: domain Description: PRK00549 Location: 1315-2 566 bp Feature: gene Location: 2654-3700 bp Feature: domain Description: Halogen_Hydrol Location: 3065-3608 bp Feature: domain Description: Halogen_Hydrol Location: 3065-3608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00549 (competence damage-inducible protein A; Provisional), Halogen_Hydrol (pfam10112), RVT-GII, GIIM (pfam08388)

Seq: PKJD01000047.1 Globicatella sanguinis strain UMB0514 ERR1203656.17957_1_68.47, whole genome shotgun sequence (18117 bp)
Overview 1 RT 1: 4114-9960 bp Neighborhood of RT #1 [4114, 9965] Uup ABC_tran_CTD YdiL RVT-GII GIIM VOC_BsYyaH Feature: gene Location: 4114-6021 bp Feature: domain Description: Uup Location: 4117-5710 bp Feature: domain Description: Uup Location: 4117-5710 bp Feature: domain Description: ABC_tran_CTD Location: 5815-6010 bp Feature: domain Description: ABC_tran_CTD Location: 5815-6010 bp Feature: gene Location: 6145-6855 bp Feature: domain Description: YdiL Location: 6175-6787 bp Feature: domain Description: YdiL Location: 6175-6787 bp Feature: gene Location: 7084-8613 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7405-8020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7405-8020 bp Feature: domain Description: GIIM Note: maturase Location: 8077-8284 bp Feature: domain Description: GIIM Note: maturase Location: 8077-8284 bp Feature: gene Location: 9148-9420 bp Feature: gene Location: 9582-9965 bp Feature: domain Description: VOC_BsYyaH Location: 9588-9960 bp Feature: domain Description: VOC_BsYyaH Location: 9588-9960 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Uup (COG0488), ABC_tran_CTD (pfam16326), YdiL (COG1266), RVT-GII, GIIM (pfam08388), VOC_BsYyaH (cd07241)

Seq: PKJD01000049.1 Globicatella sanguinis strain UMB0514 ERR1203656.17957_1_68.49, whole genome shotgun sequence (16375 bp)
Overview 1 RT 1: 13754-16374 bp Neighborhood of RT #1 [13754, 16373] glyox_I MngR RVT-GII group_II_RT_mat Feature: gene Location: 13754-14134 bp Feature: domain Description: glyox_I Location: 13763-14120 bp Feature: domain Description: glyox_I Location: 13763-14 120 bp Feature: gene Location: 14373-14669 bp Feature: domain Description: MngR Location: 14397-14628 bp Feature: domain Description: MngR Location: 14 397-14 628 bp Feature: gene Location: 15309-16373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15513-16128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15513-16128 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 16170-16374 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 16170-16374 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT glyox_I (TIGR00068), MngR (COG2188), RVT-GII, group_II_RT_mat (TIGR04416)

Seq: PKJD01000006.1 Globicatella sanguinis strain UMB0514 ERR1203656.17957_1_68.6, whole genome shotgun sequence (75573 bp)
Overview 1 RT 1: 29093-36103 bp Neighborhood of RT #1 [29093, 36333] PerM Lactonase RVT-GII GIIM YycJ-like_MBL-fold DUF2207 Feature: gene Location: 29093-30346 bp Feature: domain Description: PerM Location: 29183-30227 bp Feature: domain Description: PerM Location: 29183-30227 bp Feature: gene Location: 30518-31543 bp Feature: domain Description: Lactonase Location: 30533-31532 bp Feature: domain Description: Lactonase Location: 305 33-315 32 bp Feature: gene Location: 31678-33252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32182-32797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32182-32797 bp Feature: domain Description: GIIM Note: maturase Location: 32854-33073 bp Feature: domain Description: GIIM Note: maturase Location: 3285 4-33073 bp Feature: gene Location: 33608-34441 bp Feature: domain Description: YycJ-like_MBL-fold Location: 33668-34226 bp Feature: domain Description: YycJ-like_MBL-fold Location: 33668-34226 bp Feature: gene Location: 34444-36333 bp Feature: domain Description: DUF2207 Location: 34555-36103 bp Feature: domain Description: DUF2207 Location: 345 5 5 -36103 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PerM (COG0628), Lactonase (pfam10282), RVT-GII, GIIM (pfam08388), YycJ-like_MBL-fold (cd07733), DUF2207 (pfam09972)

Seq: PKJD01000060.1 Globicatella sanguinis strain UMB0514 ERR1203656.17957_1_68.60, whole genome shotgun sequence (11319 bp)
Overview 1 RT 1: 2-5106 bp Neighborhood of RT #1 [2, 5106] RVT-GII GIIM PRK13805 Feature: gene Location: 2-1138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68-683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 8-6 83 bp Feature: domain Description: GIIM Note: maturase Location: 740-959 bp Feature: domain Description: GIIM Note: maturase Location: 740-959 bp Feature: gene Location: 1517-4159 bp Feature: domain Description: PRK13805 Location: 1538-4124 bp Feature: domain Description: PRK13805 Location: 1538-4124 bp Feature: gene Location: 4969-5106 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13805 (bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional), RVT-GII, GIIM (pfam08388)

Seq: PKJD01000089.1 Globicatella sanguinis strain UMB0514 ERR1203656.17957_1_68.89, whole genome shotgun sequence (3508 bp)
Overview 1 RT 1: 1-2773 bp Neighborhood of RT #1 [1, 2961] HTH_23 RVT-GII GIIM COG3464 Feature: gene Location: 1-423 bp Feature: domain Description: HTH_23 Location: 13-136 bp Feature: domain Description: HTH_23 Location: 13-136 bp Feature: gene Location: 538-1695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 625-1240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 625-1240 bp Feature: domain Description: GIIM Note: maturase Location: 1300-1507 bp Feature: domain Description: GIIM Note: maturase Location: 1300-1507 bp Feature: gene Location: 1751-1933 bp Feature: gene Location: 2095-2961 bp Feature: domain Description: COG3464 Location: 2137-2773 bp Feature: domain Description: COG3464 Location: 2137 -27 7 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_23 (pfam13384), COG3464 (Transposase ), RVT-GII, GIIM (pfam08388)