myRT

myRT report for GCA_002848005.1_ASM284800v1

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Seq: PKHX01000012.1 Varibaculum cambriense strain UMB0796 ERR1203665.17957_1_77.12, whole genome shotgun sequence (34036 bp)
Overview 1 RT 1: 19596-26991 bp Neighborhood of RT #1 [19596, 27023] CcmA ABC2_membrane_3 RVT-Retrons HsdM RMtype1_S_MspEN3ORF6650P_TRD2-CR2_like RMtype1_S_MspEN3ORF6650P_TRD2-CR2_like Feature: gene Location: 19596-20360 bp Feature: domain Description: CcmA Location: 19602-20286 bp Feature: domain Description: CcmA Location: 1 9602-20286 bp Feature: gene Location: 20357-21484 bp Feature: domain Description: ABC2_membrane_3 Location: 20414-21452 bp Feature: domain Description: ABC2_membrane_3 Location: 2041 4-21 452 bp Feature: gene Location: 21910-23139 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 22144-22861 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 221 44-22861 bp Feature: gene Location: 23617-25701 bp Feature: domain Description: HsdM Location: 23644-25222 bp Feature: domain Description: HsdM Location: 23644-25222 bp Feature: gene Location: 25698-27023 bp Feature: domain Description: RMtype1_S_MspEN3ORF6650P_TRD2-CR2_like Location: 25830-26346 bp Feature: domain Description: RMtype1 _S_MspEN3ORF6650P_TRD2-CR2_like Location: 25830-26346 bp Feature: domain Description: RMtype1_S_MspEN3ORF6650P_TRD2-CR2_like Location: 26442-26991 bp Feature: domain Description: RMtype1 _S_MspEN3ORF6650P_TRD2-CR2_like Location: 26442-26991 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CcmA (COG4133), ABC2_membrane_3 (pfam12698), RVT-Retrons, HsdM (COG0286), RMtype1_S_MspEN3ORF6650P_TRD2-CR2_like (cd17280)