myRT

myRT report for GCA_002848945.1_ASM284894v1

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Seq: PJZV01000149.1 Candidatus Brocadia sp. R4W10303 contig00265, whole genome shotgun sequence (19429 bp)
Overview 1 RT 1: 170-7772 bp Neighborhood of RT #1 [170, 8641] RVT-UG14 met_A_Alw26 met_A_Alw26 met_A_Alw26 met_A_Alw26 PLDc_N_Snf2_like DEXDc_RapA DEXDc_RapA SF2_C_SNF Feature: gene Location: 170-1690 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 575-1046 bp Feature: RT Description: RVT-UG1 4 Note: UG1 4 RT Location: 575-1 046 bp Feature: gene Location: 1847-5191 bp Feature: domain Description: met_A_Alw26 Location: 3344-3413 bp Feature: domain Description: met_A_Alw26 Location: 3344-341 3 bp Feature: domain Description: met_A_Alw26 Location: 3992-4196 bp Feature: domain Description: met_A_Alw26 Location: 3992-41 96 bp Feature: domain Description: met_A_Alw26 Location: 4226-4646 bp Feature: domain Description: met_A_Alw26 Location: 4226-4646 bp Feature: domain Description: met_A_Alw26 Location: 4796-4976 bp Feature: domain Description: met_A_Alw26 Location: 4796-4976 bp Feature: gene Location: 5291-8641 bp Feature: domain Description: PLDc_N_Snf2_like Location: 5303-5879 bp Feature: domain Description: PLDc_N_Snf2_like Location: 5303-5879 bp Feature: domain Description: DEXDc_RapA Location: 6056-6281 bp Feature: domain Description: DEXDc_RapA Location: 6056-6281 bp Feature: domain Description: DEXDc_RapA Location: 6317-6506 bp Feature: domain Description: DEXDc_RapA Location: 631 7-6506 bp Feature: domain Description: SF2_C_SNF Location: 7418-7772 bp Feature: domain Description: SF2_C_SNF Location: 741 8-7772 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG14, met_A_Alw26 (TIGR02987), PLDc_N_Snf2_like (cd09178), DEXDc_RapA (cd18011), SF2_C_SNF (cd18793)

Seq: PJZV01000026.1 Candidatus Brocadia sp. R4W10303 contig00556, whole genome shotgun sequence (10828 bp)
Overview 1 RT 1: 3-2288 bp Neighborhood of RT #1 [3, 2288] GxxExxY RVT-CRISPR Cas_csx3 Feature: gene Location: 3-143 bp Feature: domain Description: GxxExxY Location: 15-123 bp Feature: domain Description: GxxExxY Location: 15-12 3 bp Feature: gene Location: 186-1121 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 387-984 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 387-984 bp Feature: gene Location: 1123-1362 bp Feature: domain Description: Cas_csx3 Location: 1225-1354 bp Feature: domain Description: Cas_csx3 Location: 12 2 5-1354 bp Feature: gene Location: 1359-2288 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GxxExxY (TIGR04256), RVT-CRISPR, Cas_csx3 (pfam09620)