myRT

myRT report for GCA_002849045.2_ASM284904v2

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Seq: NCRO01000170.1 Candidatus Atribacteria bacterium RS-JS1 contig167-1, whole genome shotgun sequence (3328 bp)
Overview 1 RT 1: 65-3008 bp Neighborhood of RT #1 [65, 3008] PRK05476 RVT-GII GIIM RVT-GII Feature: gene Location: 65-1237 bp Feature: domain Description: PRK05476 Location: 179-1220 bp Feature: domain Description: PRK05476 Location: 1 79-1 220 bp Feature: gene Location: 1515-2252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1524-1806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 524-1 806 bp Feature: domain Description: GIIM Note: maturase Location: 1860-2082 bp Feature: domain Description: GIIM Note: maturase Location: 1 860-2082 bp Feature: gene Location: 2263-2487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2275-2464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2275-2464 bp Feature: gene Location: 2660-2851 bp Feature: gene Location: 2784-3008 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK05476 (S-adenosyl-L-homocysteine hydrolase; Provisional)

Seq: NCRO01000026.1 Candidatus Atribacteria bacterium RS-JS1 contig26, whole genome shotgun sequence (9949 bp)
Overview 1 RT 1: 1-5230 bp Neighborhood of RT #1 [1, 5247] glmU RVT-GII SpoVG ksgA Feature: gene Location: 1-699 bp Feature: domain Description: glmU Location: 13-700 bp Feature: domain Description: glmU Location: 13-700 bp Feature: gene Location: 891-2168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1146-1812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1146-1812 bp Feature: gene Location: 3252-3686 bp Feature: domain Description: SpoVG Location: 3267-3531 bp Feature: domain Description: SpoVG Location: 32 67-3531 bp Feature: gene Location: 4366-5247 bp Feature: domain Description: ksgA Location: 4396-5230 bp Feature: domain Description: ksgA Location: 4396-52 30 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SpoVG (pfam04026), ksgA (TIGR00755), RVT-GII

Seq: NCRO01000290.1 Candidatus Atribacteria bacterium RS-JS1 contig286, whole genome shotgun sequence (1724 bp)
Overview 1 RT 1: 1-1430 bp Neighborhood of RT #1 [1, 1525] RVT-GII GIIM Feature: gene Location: 1-225 bp Feature: gene Location: 239-1525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 494-1160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 494-1160 bp Feature: domain Description: GIIM Note: maturase Location: 1256-1430 bp Feature: domain Description: GIIM Note: maturase Location: 1256-143 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NCRO01000060.1 Candidatus Atribacteria bacterium RS-JS1 contig60, whole genome shotgun sequence (6968 bp)
Overview 1 RT 1: 1-3841 bp Neighborhood of RT #1 [1, 3855] RVT-DGRs Avd_like CarboxypepD_reg DUF5018 DUF1566 Feature: gene Location: 1-1284 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 418-1117 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4 18-1117 bp Feature: gene Location: 1467-1808 bp Feature: domain Description: Avd_like Location: 1494-1797 bp Feature: domain Description: Avd_like Location: 14 94 -1797 bp Feature: gene Location: 1873-3855 bp Feature: domain Description: CarboxypepD_reg Location: 2002-2209 bp Feature: domain Description: CarboxypepD_reg Location: 2002-2209 bp Feature: domain Description: DUF5018 Location: 2497-2890 bp Feature: domain Description: DUF5018 Location: 24 97-2890 bp Feature: domain Description: DUF1566 Location: 3442-3841 bp Feature: domain Description: DUF1566 Location: 34 4 2-384 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), CarboxypepD_reg (pfam13620), DUF5018 (pfam16410), DUF1566 (pfam07603)