myRT

myRT report for GCA_002849135.1_ASM284913v1

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Seq: PKKU01000056.1 Escherichia coli strain JEONG-9567 NODE_38_length_40118_cov_10.7462_ID_77, whole genome shotgun sequence (40118 bp)
Overview 1 RT 1: 37367-39997 bp Neighborhood of RT #1 [37367, 40116] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT-GII Feature: gene Location: 37367-38773 bp Feature: domain Description: LZ_Tnp_IS66 Location: 37484-37697 bp Feature: domain Description: LZ_Tnp_IS66 Location: 37484-37697 bp Feature: domain Description: zf-IS66 Location: 37718-37850 bp Feature: domain Description: zf-IS66 Location: 3771 8-37850 bp Feature: domain Description: DDE_Tnp_IS66 Location: 37895-38732 bp Feature: domain Description: DDE_Tnp_IS66 Location: 37895-38732 bp Feature: gene Location: 38981-39142 bp Feature: gene Location: 39235-40116 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39436-39997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39436-39997 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT-GII

Seq: PKKU01000085.1 Escherichia coli strain JEONG-9567 NODE_62_length_13396_cov_21.2762_ID_125, whole genome shotgun sequence (13396 bp)
Overview 1 RT 1: 8273-12715 bp Neighborhood of RT #1 [8273, 12717] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 8273-9544 bp Feature: domain Description: umuC Location: 8276-9536 bp Feature: domain Description: umuC Location: 82 76-9536 bp Feature: gene Location: 9544-10356 bp Feature: domain Description: PRK10276 Location: 9976-10339 bp Feature: domain Description: PRK102 76 Location: 9976-10339 bp Feature: gene Location: 10381-11868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10786-11476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10786-11476 bp Feature: gene Location: 12020-12295 bp Feature: domain Description: InsA Location: 12023-12287 bp Feature: domain Description: InsA Location: 12 02 3-12 2 87 bp Feature: gene Location: 12214-12717 bp Feature: domain Description: DDE_Tnp_IS1 Location: 12325-12715 bp Feature: domain Description: DDE_Tnp_IS1 Location: 12 32 5-12 715 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)