myRT

myRT report for GCA_002849465.1_ASM284946v1

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Seq: PKOK01000042.1 Klebsiella pneumoniae strain BA1625 NODE_42_length_42253_cov_20.1797_ID_83, whole genome shotgun sequence (42253 bp)
Overview 1 RT 1: 712-6711 bp Neighborhood of RT #1 [712, 6821] INT_P4_C Integrase_1 RVT-UG4 FimD PapC_N Feature: gene Location: 712-1377 bp Feature: domain Description: INT_P4_C Location: 817-1375 bp Feature: domain Description: INT_P4_C Location: 81 7-1 375 bp Feature: gene Location: 1638-2078 bp Feature: domain Description: Integrase_1 Location: 1644-1860 bp Feature: domain Description: Integrase_1 Location: 1 644-1 860 bp Feature: gene Location: 2135-4213 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2543-2987 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2543-2987 bp Feature: gene Location: 4213-6153 bp Feature: domain Description: FimD Location: 4246-6142 bp Feature: domain Description: FimD Location: 4246-61 42 bp Feature: gene Location: 6150-6821 bp Feature: domain Description: PapC_N Location: 6276-6711 bp Feature: domain Description: PapC_N Location: 6276-671 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), PapC_N (pfam13954)

Seq: PKOK01000097.1 Klebsiella pneumoniae strain BA1625 NODE_97_length_1914_cov_113.095_ID_193, whole genome shotgun sequence (1914 bp)
Overview 1 RT 1: 59-1912 bp Neighborhood of RT #1 [59, 1912] RVT-GII Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: gene Location: 1700-1912 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII