myRT

myRT report for GCA_002850795.1_ASM285079v1

Download annotations/find similar RTs

Seq: NCMV01000052.1 Klebsiella pneumoniae strain COL-Kpn42 contig_32, whole genome shotgun sequence (4261 bp)
Overview 1 RT 1: 1033-4067 bp Neighborhood of RT #1 [1033, 4067] RVT-Retrons CspC Feature: gene Location: 1033-1410 bp Feature: gene Location: 2044-2226 bp Feature: gene Location: 2248-3387 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2392-2947 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2392-2947 bp Feature: gene Location: 3392-3595 bp Feature: domain Description: CspC Location: 3395-3590 bp Feature: domain Description: CspC Location: 3395-3590 bp Feature: gene Location: 3804-4067 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, CspC (COG1278)

Seq: NCMV01000090.1 Klebsiella pneumoniae strain COL-Kpn42 contig_64, whole genome shotgun sequence (1915 bp)
Overview 1 RT 1: 59-1912 bp Neighborhood of RT #1 [59, 1912] RVT-GII Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: gene Location: 1700-1912 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NCMV01000092.1 Klebsiella pneumoniae strain COL-Kpn42 contig_66, whole genome shotgun sequence (3401 bp)
Overview 1 RT 1: 2-3385 bp Neighborhood of RT #1 [2, 3399] PRK09692 INT_P4_C RVT-UG3 RVT-UG3 RVT-UG8 Feature: gene Location: 2-346 bp Feature: domain Description: PRK09692 Location: 14-332 bp Feature: domain Description: PRK09692 Location: 14-3 3 2 bp Feature: gene Location: 359-1024 bp Feature: domain Description: INT_P4_C Location: 467-998 bp Feature: domain Description: INT_P4_C Location: 467-998 bp Feature: gene Location: 1203-1805 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1491-1776 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1491-1776 bp Feature: gene Location: 1790-2485 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1796-1997 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1796-1997 bp Feature: gene Location: 2482-3399 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3001-3385 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3 001-3 3 85 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), INT_P4_C (cd00801), RVT-UG3, RVT-UG8