myRT

myRT report for GCA_002850965.1_ASM285096v1

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Seq: NCMI01000049.1 Klebsiella pneumoniae strain COL-Kpn29 contig_24, whole genome shotgun sequence (19463 bp)
Overview 1 RT 1: 16418-19109 bp Neighborhood of RT #1 [16418, 19354] HTH_17 PHA02517 RVT-GII GIIM Feature: gene Location: 16418-16699 bp Feature: domain Description: HTH_17 Location: 16445-16589 bp Feature: domain Description: HTH_1 7 Location: 1 6445-1 6589 bp Feature: gene Location: 17004-17258 bp Feature: domain Description: PHA02517 Location: 17007-17178 bp Feature: domain Description: PHA0251 7 Location: 1 7007-1 71 78 bp Feature: gene Location: 17831-19354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18104-18836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 81 04-1 8836 bp Feature: domain Description: GIIM Note: maturase Location: 18914-19109 bp Feature: domain Description: GIIM Note: maturase Location: 1 891 4-1 91 09 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: NCMI01000050.1 Klebsiella pneumoniae strain COL-Kpn29 contig_25, whole genome shotgun sequence (1780 bp)
Overview 1 RT 1: 1-1779 bp Neighborhood of RT #1 [1, 1779] RVT-GII Feature: gene Location: 1-1410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403-1093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403-1093 bp Feature: gene Location: 1567-1779 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NCMI01000079.1 Klebsiella pneumoniae strain COL-Kpn29 contig_45, whole genome shotgun sequence (4582 bp)
Overview 1 RT 1: 36-4129 bp Neighborhood of RT #1 [36, 4194] COG3547 RVT-GII GIIM PHA02517 Feature: gene Location: 36-1112 bp Feature: domain Description: COG3547 Location: 75-996 bp Feature: domain Description: COG3 547 Location: 75-996 bp Feature: gene Location: 1361-1567 bp Feature: gene Location: 1654-3177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1927-2659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1927-2659 bp Feature: domain Description: GIIM Note: maturase Location: 2734-2932 bp Feature: domain Description: GIIM Note: maturase Location: 273 4-293 2 bp Feature: gene Location: 3131-3556 bp Feature: gene Location: 3769-4194 bp Feature: domain Description: PHA02517 Location: 3793-4129 bp Feature: domain Description: PHA02517 Location: 3 793 -4129 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3547 (Transposase )