myRT

myRT report for GCA_002851015.1_ASM285101v1

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Seq: NCMG01000021.1 Klebsiella pneumoniae strain COL-Kpn27 contig_10_0, whole genome shotgun sequence (186577 bp)
Overview 1 RT 1: 31917-38770 bp Neighborhood of RT #1 [31917, 38787] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 31917-32582 bp Feature: domain Description: INT_P4_C Location: 32022-32580 bp Feature: domain Description: INT_P4_C Location: 32022-32580 bp Feature: gene Location: 32843-33283 bp Feature: domain Description: Integrase_1 Location: 32849-33065 bp Feature: domain Description: Integrase_1 Location: 32849-33065 bp Feature: gene Location: 33340-35418 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33748-34192 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33748-341 92 bp Feature: gene Location: 35418-38027 bp Feature: domain Description: FimD Location: 35475-38016 bp Feature: domain Description: FimD Location: 35475-3801 6 bp Feature: gene Location: 38059-38787 bp Feature: domain Description: FimC Location: 38107-38770 bp Feature: domain Description: FimC Location: 381 07-38770 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: NCMG01000059.1 Klebsiella pneumoniae strain COL-Kpn27 contig_38, whole genome shotgun sequence (1893 bp)
Overview 1 RT 1: 60-1892 bp Neighborhood of RT #1 [60, 1892] RVT-GII Feature: gene Location: 60-1547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465-1155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465-1155 bp Feature: gene Location: 1701-1892 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII