myRT

myRT report for GCA_002851275.1_ASM285127v1

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Seq: NCLO01000020.1 Klebsiella pneumoniae strain COL-Kpn9 contig_14_0, whole genome shotgun sequence (44904 bp)
Overview 1 RT 1: 8134-11723 bp Neighborhood of RT #1 [8134, 11746] DUF1496 YdiL RVT-GII PRK10276 Feature: gene Location: 8134-8484 bp Feature: domain Description: DUF1496 Location: 8332-8416 bp Feature: domain Description: DUF1 496 Location: 8332-841 6 bp Feature: gene Location: 8597-9250 bp Feature: domain Description: YdiL Location: 8621-9218 bp Feature: domain Description: YdiL Location: 8621 -921 8 bp Feature: gene Location: 9427-10914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9832-10522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9832-1 0522 bp Feature: gene Location: 10920-11087 bp Feature: gene Location: 11312-11746 bp Feature: domain Description: PRK10276 Location: 11360-11723 bp Feature: domain Description: PRK1 0276 Location: 1 1 360-1 1 723 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DUF1496 (pfam07383), YdiL (COG1266), RVT-GII

Seq: NCLO01000025.1 Klebsiella pneumoniae strain COL-Kpn9 contig_17_1, whole genome shotgun sequence (62057 bp)
Overview 1 RT 1: 46771-52141 bp Neighborhood of RT #1 [46771, 52141] HTH_XRE RVT-Retrons PRK13889 Feature: gene Location: 46771-46986 bp Feature: gene Location: 47077-47358 bp Feature: domain Description: HTH_XRE Location: 47092-47257 bp Feature: domain Description: HTH_XRE Location: 47092 -472 57 bp Feature: gene Location: 47351-48451 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47492-48044 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47492 -48044 bp Feature: gene Location: 48528-50030 bp Feature: domain Description: PRK13889 Location: 48531-49110 bp Feature: domain Description: PRK13889 Location: 48531-49110 bp Feature: gene Location: 51632-52141 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, PRK13889 (conjugal transfer relaxase TraA; Provisional)

Seq: NCLO01000001.1 Klebsiella pneumoniae strain COL-Kpn9 contig_1_0, whole genome shotgun sequence (59067 bp)
Overview 1 RT 1: 55684-58741 bp Neighborhood of RT #1 [55684, 58977] TIGR02646 COG3950 RVT-Retrons Feature: gene Location: 55684-56415 bp Feature: domain Description: TIGR02646 Location: 55783-56293 bp Feature: domain Description: TIGR02646 Location: 55783 -56293 bp Feature: gene Location: 56415-58040 bp Feature: domain Description: COG3950 Location: 56589-57972 bp Feature: domain Description: COG3 950 Location: 56589-57972 bp Feature: gene Location: 58045-58977 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 58144-58741 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 58144-58741 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons