myRT

myRT report for GCA_002851575.1_ASM285157v1

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Seq: NCLN01000001.1 Klebsiella pneumoniae strain COL-Kpn8 contig_1, whole genome shotgun sequence (353855 bp)
Overview 1 RT 1: 51764-58617 bp Neighborhood of RT #1 [51764, 58634] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 51764-52429 bp Feature: domain Description: INT_P4_C Location: 51869-52427 bp Feature: domain Description: INT_P4_C Location: 51 869-52427 bp Feature: gene Location: 52690-53130 bp Feature: domain Description: Integrase_1 Location: 52696-52912 bp Feature: domain Description: Integrase_1 Location: 52696-5291 2 bp Feature: gene Location: 53187-55265 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 53595-54039 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 53595-54039 bp Feature: gene Location: 55265-57874 bp Feature: domain Description: FimD Location: 55322-57863 bp Feature: domain Description: FimD Location: 55322-57863 bp Feature: gene Location: 57906-58634 bp Feature: domain Description: FimC Location: 57939-58617 bp Feature: domain Description: FimC Location: 57939-5861 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: NCLN01000031.1 Klebsiella pneumoniae strain COL-Kpn8 contig_29, whole genome shotgun sequence (1915 bp)
Overview 1 RT 1: 61-1914 bp Neighborhood of RT #1 [61, 1914] RVT-GII Feature: gene Location: 61-1548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466-1156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466-1156 bp Feature: gene Location: 1702-1914 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII