myRT

myRT report for GCA_002851795.1_ASM285179v1

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Seq: NTFV01000142.1 Mycobacterium chimaera strain WCHMC000032 NODE_142_length_605_cov_129.812, whole genome shotgun sequence (605 bp)
Overview 1 RT 1: 1-604 bp Neighborhood of RT #1 [1, 603] RVT-GII Feature: gene Location: 1-603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 379-604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 379-604 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NTFV01000143.1 Mycobacterium chimaera strain WCHMC000032 NODE_143_length_605_cov_124.197, whole genome shotgun sequence (605 bp)
Overview 1 RT 1: 1-604 bp Neighborhood of RT #1 [1, 603] RVT-GII Feature: gene Location: 1-603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 379-604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 379-604 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NTFV01000152.1 Mycobacterium chimaera strain WCHMC000032 NODE_152_length_456_cov_270.641, whole genome shotgun sequence (456 bp)
Overview 1 RT 1: 1-451 bp Neighborhood of RT #1 [1, 453] RVT-GII Feature: gene Location: 1-453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NTFV01000037.1 Mycobacterium chimaera strain WCHMC000032 NODE_37_length_48390_cov_12.4361, whole genome shotgun sequence (48390 bp)
Overview 1 RT 1: 14515-19520 bp Neighborhood of RT #1 [14515, 19840] DUF1490 HTH_ARSR RVT-GII GIIM QcrB Feature: gene Location: 14515-14796 bp Feature: domain Description: DUF1490 Location: 14518-14764 bp Feature: domain Description: DUF14 90 Location: 14 518-14 764 bp Feature: gene Location: 14831-15172 bp Feature: domain Description: HTH_ARSR Location: 14849-15068 bp Feature: domain Description: HTH_ARSR Location: 14 84 9-15068 bp Feature: gene Location: 15871-17382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16252-16945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16252-1694 5 bp Feature: domain Description: GIIM Note: maturase Location: 17020-17242 bp Feature: domain Description: GIIM Note: maturase Location: 17020-1724 2 bp Feature: gene Location: 17838-17996 bp Feature: gene Location: 18206-19840 bp Feature: domain Description: QcrB Location: 18233-19520 bp Feature: domain Description: QcrB Location: 18233-19520 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1490 (pfam07371), HTH_ARSR (smart00418), RVT-GII, GIIM (pfam08388), QcrB (COG1290)

Seq: NTFV01000047.1 Mycobacterium chimaera strain WCHMC000032 NODE_47_length_32214_cov_406.381, whole genome shotgun sequence (32214 bp)
Overview 1 RT 1: 23827-28323 bp Neighborhood of RT #1 [23827, 28323] HAUS5 RVT-UG23 Feature: gene Location: 23827-23973 bp Feature: gene Location: 24587-25213 bp Feature: domain Description: HAUS5 Location: 24929-25193 bp Feature: domain Description: HAUS5 Location: 24929-25 193 bp Feature: gene Location: 25612-27156 bp Feature: RT Description: RVT-UG23 Note: UG23 RT Location: 25810-26461 bp Feature: RT Description: RVT-UG23 Note: UG23 RT Location: 25 810-26461 bp Feature: gene Location: 27362-27847 bp Feature: gene Location: 27973-28323 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HAUS5 (pfam14817), RVT-UG23

Seq: NTFV01000053.1 Mycobacterium chimaera strain WCHMC000032 NODE_53_length_23624_cov_121.986, whole genome shotgun sequence (23624 bp)
Overview 1 RT 1: 17578-20413 bp Neighborhood of RT #1 [17578, 20413] rve RVT-GII GIIM Feature: gene Location: 17578-17784 bp Feature: gene Location: 17804-18085 bp Feature: domain Description: rve Location: 17810-17930 bp Feature: domain Description: rve Location: 17810-17930 bp Feature: gene Location: 18220-19668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18538-19225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18538-19225 bp Feature: domain Description: GIIM Note: maturase Location: 19300-19495 bp Feature: domain Description: GIIM Note: maturase Location: 19300-19495 bp Feature: gene Location: 19671-19829 bp Feature: gene Location: 20198-20413 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve (pfam00665), RVT-GII, GIIM (pfam08388)

Seq: NTFV01000077.1 Mycobacterium chimaera strain WCHMC000032 NODE_77_length_11454_cov_121.405, whole genome shotgun sequence (11454 bp)
Overview 1 RT 1: 10010-11306 bp Neighborhood of RT #1 [10010, 11452] AdaB RVT-GII GIIM Feature: gene Location: 10010-10318 bp Feature: gene Location: 10371-10526 bp Feature: domain Description: AdaB Location: 10374-10497 bp Feature: domain Description: AdaB Location: 1037 4-10497 bp Feature: gene Location: 10853-11452 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10856-11018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10856-11018 bp Feature: domain Description: GIIM Note: maturase Location: 11087-11306 bp Feature: domain Description: GIIM Note: maturase Location: 11087 -11306 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AdaB (COG0350), RVT-GII, GIIM (pfam08388)

Seq: NTFV01000095.1 Mycobacterium chimaera strain WCHMC000032 NODE_95_length_3834_cov_116.206, whole genome shotgun sequence (3834 bp)
Overview 1 RT 1: 3-1177 bp Neighborhood of RT #1 [3, 1177] RVT-GII GIIM Feature: gene Location: 3-602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-168 bp Feature: domain Description: GIIM Note: maturase Location: 237-456 bp Feature: domain Description: GIIM Note: maturase Location: 237-456 bp Feature: gene Location: 630-881 bp Feature: gene Location: 902-1177 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)