myRT

myRT report for GCA_002851815.1_ASM285181v1

Download annotations/find similar RTs

Seq: NTFW01000041.1 Mycobacterium chimaera strain WCHMC000030 NODE_41_length_32214_cov_532.108, whole genome shotgun sequence (32214 bp)
Overview 1 RT 1: 4682-9178 bp Neighborhood of RT #1 [4682, 9178] HAUS5 RVT-UG23 Feature: gene Location: 4682-4828 bp Feature: gene Location: 5442-6068 bp Feature: domain Description: HAUS5 Location: 5784-6048 bp Feature: domain Description: HAUS5 Location: 5784-6048 bp Feature: gene Location: 6467-8011 bp Feature: RT Description: RVT-UG23 Note: UG23 RT Location: 6665-7316 bp Feature: RT Description: RVT-UG23 Note: UG23 RT Location: 6665-731 6 bp Feature: gene Location: 8217-8702 bp Feature: gene Location: 8828-9178 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HAUS5 (pfam14817), RVT-UG23

Seq: NTFW01000046.1 Mycobacterium chimaera strain WCHMC000030 NODE_46_length_23624_cov_131.415, whole genome shotgun sequence (23624 bp)
Overview 1 RT 1: 17578-20413 bp Neighborhood of RT #1 [17578, 20413] rve RVT-GII GIIM Feature: gene Location: 17578-17784 bp Feature: gene Location: 17804-18085 bp Feature: domain Description: rve Location: 17810-17930 bp Feature: domain Description: rve Location: 17810-17930 bp Feature: gene Location: 18220-19668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18538-19225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18538-192 2 5 bp Feature: domain Description: GIIM Note: maturase Location: 19300-19495 bp Feature: domain Description: GIIM Note: maturase Location: 19300-19495 bp Feature: gene Location: 19671-19829 bp Feature: gene Location: 20198-20413 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve (pfam00665), RVT-GII, GIIM (pfam08388)

Seq: NTFW01000059.1 Mycobacterium chimaera strain WCHMC000030 NODE_59_length_12360_cov_130.317, whole genome shotgun sequence (12360 bp)
Overview 1 RT 1: 10009-12211 bp Neighborhood of RT #1 [10009, 12357] AdaB RVT-GII GIIM Feature: gene Location: 10009-10317 bp Feature: gene Location: 10370-10525 bp Feature: domain Description: AdaB Location: 10373-10496 bp Feature: domain Description: AdaB Location: 103 73 -10496 bp Feature: gene Location: 10852-12357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11227-11923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11227-11923 bp Feature: domain Description: GIIM Note: maturase Location: 11992-12211 bp Feature: domain Description: GIIM Note: maturase Location: 11992-12211 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AdaB (COG0350), RVT-GII, GIIM (pfam08388)

Seq: NTFW01000071.1 Mycobacterium chimaera strain WCHMC000030 NODE_71_length_4741_cov_124.792, whole genome shotgun sequence (4741 bp)
Overview 1 RT 1: 1-2084 bp Neighborhood of RT #1 [1, 2084] RVT-GII GIIM Feature: gene Location: 1-1509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 379-1075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 379-1075 bp Feature: domain Description: GIIM Note: maturase Location: 1144-1357 bp Feature: domain Description: GIIM Note: maturase Location: 114 4 -1357 bp Feature: gene Location: 1537-1788 bp Feature: gene Location: 1809-2084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)