myRT

myRT report for GCA_002851835.1_ASM285183v1

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Seq: NTFX01000046.1 Mycobacterium chimaera strain WCHMC000001 NODE_46_length_32214_cov_537.803, whole genome shotgun sequence (32214 bp)
Overview 1 RT 1: 13774-18270 bp Neighborhood of RT #1 [13774, 18270] RVT-UG23 HAUS5 Feature: gene Location: 13774-14124 bp Feature: gene Location: 14250-14735 bp Feature: gene Location: 14941-16485 bp Feature: RT Description: RVT-UG23 Note: UG23 RT Location: 15139-15790 bp Feature: RT Description: RVT-UG23 Note: UG23 RT Location: 1 51 39-1 5790 bp Feature: gene Location: 16884-17510 bp Feature: domain Description: HAUS5 Location: 17226-17490 bp Feature: domain Description: HAUS5 Location: 1 7226-1 7490 bp Feature: gene Location: 18124-18270 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG23, HAUS5 (pfam14817)

Seq: NTFX01000055.1 Mycobacterium chimaera strain WCHMC000001 NODE_55_length_23624_cov_133.732, whole genome shotgun sequence (23624 bp)
Overview 1 RT 1: 17578-20413 bp Neighborhood of RT #1 [17578, 20413] rve RVT-GII GIIM Feature: gene Location: 17578-17784 bp Feature: gene Location: 17804-18085 bp Feature: domain Description: rve Location: 17810-17930 bp Feature: domain Description: rve Location: 17810-17930 bp Feature: gene Location: 18220-19668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18538-19225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18538-192 2 5 bp Feature: domain Description: GIIM Note: maturase Location: 19300-19495 bp Feature: domain Description: GIIM Note: maturase Location: 19300-19495 bp Feature: gene Location: 19671-19829 bp Feature: gene Location: 20198-20413 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve (pfam00665), RVT-GII, GIIM (pfam08388)

Seq: NTFX01000067.1 Mycobacterium chimaera strain WCHMC000001 NODE_67_length_12360_cov_130.11, whole genome shotgun sequence (12360 bp)
Overview 1 RT 1: 10009-12211 bp Neighborhood of RT #1 [10009, 12357] AdaB RVT-GII GIIM Feature: gene Location: 10009-10317 bp Feature: gene Location: 10370-10525 bp Feature: domain Description: AdaB Location: 10373-10496 bp Feature: domain Description: AdaB Location: 103 73 -10496 bp Feature: gene Location: 10852-12357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11227-11923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11227-11923 bp Feature: domain Description: GIIM Note: maturase Location: 11992-12211 bp Feature: domain Description: GIIM Note: maturase Location: 11992-12211 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AdaB (COG0350), RVT-GII, GIIM (pfam08388)

Seq: NTFX01000080.1 Mycobacterium chimaera strain WCHMC000001 NODE_80_length_4741_cov_133.476, whole genome shotgun sequence (4741 bp)
Overview 1 RT 1: 1-2084 bp Neighborhood of RT #1 [1, 2084] RVT-GII GIIM Feature: gene Location: 1-1509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 379-1075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 379-1075 bp Feature: domain Description: GIIM Note: maturase Location: 1144-1357 bp Feature: domain Description: GIIM Note: maturase Location: 114 4 -1357 bp Feature: gene Location: 1537-1788 bp Feature: gene Location: 1809-2084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)