myRT

myRT report for GCA_002852635.1_ASM285263v1

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Seq: NWDQ01000054.1 Klebsiella pneumoniae subsp. pneumoniae strain WCHKP020128 NODE_54_length_13912_cov_203.515, whole genome shotgun sequence (13912 bp)
Overview 1 RT 1: 7346-10399 bp Neighborhood of RT #1 [7346, 10399] DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 7346-7768 bp Feature: domain Description: DUF1380 Location: 7349-7643 bp Feature: domain Description: DUF1 380 Location: 7349-7643 bp Feature: gene Location: 7765-7956 bp Feature: gene Location: 8270-9937 bp Feature: domain Description: RVT_N Location: 8318-8555 bp Feature: domain Description: RVT_N Location: 831 8-8555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8606-9248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8606-9248 bp Feature: domain Description: GIIM Note: maturase Location: 9299-9533 bp Feature: domain Description: GIIM Note: maturase Location: 9299-9533 bp Feature: domain Description: HNHc Note: nucleases Location: 9743-9902 bp Feature: domain Description: HNHc Note: nucleases Location: 9743-9902 bp Feature: gene Location: 9974-10120 bp Feature: gene Location: 10217-10399 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NWDQ01000081.1 Klebsiella pneumoniae subsp. pneumoniae strain WCHKP020128 NODE_81_length_3501_cov_6.52423, whole genome shotgun sequence (3501 bp)
Overview 1 RT 1: 125-3495 bp Neighborhood of RT #1 [125, 3500] RVT-UNC DUF1725 L1-EN Feature: gene Location: 125-2668 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 425-1082 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 42 5-1082 bp Feature: domain Description: DUF1725 Location: 2567-2621 bp Feature: domain Description: DUF172 5 Location: 2 567-2 62 1 bp Feature: gene Location: 2893-3156 bp Feature: gene Location: 3246-3500 bp Feature: domain Description: L1-EN Location: 3273-3495 bp Feature: domain Description: L1-EN Location: 32 73-3495 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC), DUF1725 (pfam08333), L1-EN (cd09076)

Seq: NWDQ01000093.1 Klebsiella pneumoniae subsp. pneumoniae strain WCHKP020128 NODE_93_length_1892_cov_1537.95, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 347-1442 bp Neighborhood of RT #1 [347, 1834] RVT-GII Feature: gene Location: 347-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII