myRT

myRT report for GCA_002852645.1_ASM285264v1

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Seq: NWDR01000054.1 Klebsiella pneumoniae subsp. pneumoniae strain WCHKP020127 NODE_54_length_13912_cov_174.824, whole genome shotgun sequence (13912 bp)
Overview 1 RT 1: 2839-6442 bp Neighborhood of RT #1 [2839, 6567] RVT_N RVT-GII GIIM HNHc DUF1380 Feature: gene Location: 2839-3096 bp Feature: gene Location: 3127-3402 bp Feature: gene Location: 3976-5643 bp Feature: RT Description: RVT_N Location: 4024-4261 bp Feature: RT Description: RVT_N Location: 4024-4261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4312-4954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431 2-4954 bp Feature: domain Description: GIIM Note: maturase Location: 5005-5239 bp Feature: domain Description: GIIM Note: maturase Location: 5005-5239 bp Feature: domain Description: HNHc Note: nucleases Location: 5449-5608 bp Feature: domain Description: HNHc Note: nucleases Location: 5449-5608 bp Feature: gene Location: 5957-6148 bp Feature: gene Location: 6145-6567 bp Feature: domain Description: DUF1380 Location: 6148-6442 bp Feature: domain Description: DUF1 380 Location: 61 48-6442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128)

Seq: NWDR01000066.1 Klebsiella pneumoniae subsp. pneumoniae strain WCHKP020127 NODE_67_length_5690_cov_31.7765, whole genome shotgun sequence (5690 bp)
Overview 1 RT 1: 669-5529 bp Neighborhood of RT #1 [669, 5576] Transposase_22 Tnp_22_dsRBD L1-EN RVT-GII DUF1725 Feature: gene Location: 669-815 bp Feature: gene Location: 1083-1685 bp Feature: domain Description: Transposase_22 Location: 1134-1425 bp Feature: domain Description: Transposase_2 2 Location: 1134-142 5 bp Feature: domain Description: Tnp_22_dsRBD Location: 1434-1626 bp Feature: domain Description: Tnp_2 2 _dsRBD Location: 1434-162 6 bp Feature: gene Location: 1749-5576 bp Feature: domain Description: L1-EN Location: 1779-2460 bp Feature: domain Description: L1-EN Location: 1779-2 460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3333-3990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3333-3990 bp Feature: domain Description: DUF1725 Location: 5475-5529 bp Feature: domain Description: DUF172 5 Location: 5475-552 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_22 (pfam02994), Tnp_22_dsRBD (pfam17490), L1-EN (cd09076), RVT-GII, DUF1725 (pfam08333)

Seq: NWDR01000086.1 Klebsiella pneumoniae subsp. pneumoniae strain WCHKP020127 NODE_89_length_1892_cov_1706.48, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 347-1442 bp Neighborhood of RT #1 [347, 1834] RVT-GII Feature: gene Location: 347-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII