myRT

myRT report for GCA_002852695.1_ASM285269v1

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Seq: NWDS01000056.1 Klebsiella pneumoniae subsp. pneumoniae strain WCHKP020126 NODE_56_length_13912_cov_236.722, whole genome shotgun sequence (13912 bp)
Overview 1 RT 1: 7346-10399 bp Neighborhood of RT #1 [7346, 10399] DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 7346-7768 bp Feature: domain Description: DUF1380 Location: 7349-7643 bp Feature: domain Description: DUF1 380 Location: 7349-7643 bp Feature: gene Location: 7765-7956 bp Feature: gene Location: 8270-9937 bp Feature: RT Description: RVT_N Location: 8318-8555 bp Feature: RT Description: RVT_N Location: 831 8-8555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8606-9248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8606-9248 bp Feature: domain Description: GIIM Note: maturase Location: 9299-9533 bp Feature: domain Description: GIIM Note: maturase Location: 9299-9533 bp Feature: domain Description: HNHc Note: nucleases Location: 9743-9902 bp Feature: domain Description: HNHc Note: nucleases Location: 9743-9902 bp Feature: gene Location: 9974-10120 bp Feature: gene Location: 10217-10399 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NWDS01000083.1 Klebsiella pneumoniae subsp. pneumoniae strain WCHKP020126 NODE_83_length_3144_cov_6.27184, whole genome shotgun sequence (3144 bp)
Overview 1 RT 1: 358-3141 bp Neighborhood of RT #1 [358, 3143] DUF1725 RVT-GII RT_nLTR_like Feature: gene Location: 358-960 bp Feature: domain Description: DUF1725 Location: 859-913 bp Feature: domain Description: DUF172 5 Location: 859-913 bp Feature: gene Location: 957-2399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 963-1416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 963-1416 bp Feature: gene Location: 2532-3143 bp Feature: domain Description: RT_nLTR_like Location: 3030-3141 bp Feature: domain Description: RT_nLTR_like Location: 3030-3141 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RT_nLTR_like (cd01650), DUF1725 (pfam08333), RVT-GII

Seq: NWDS01000089.1 Klebsiella pneumoniae subsp. pneumoniae strain WCHKP020126 NODE_89_length_1892_cov_1890.09, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 347-1442 bp Neighborhood of RT #1 [347, 1834] RVT-GII Feature: gene Location: 347-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII