myRT

myRT report for GCA_002852775.1_ASM285277v1

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Seq: NWDW01000057.1 Klebsiella pneumoniae subsp. pneumoniae strain WCHKP020111 NODE_57_length_13912_cov_293.249, whole genome shotgun sequence (13912 bp)
Overview 1 RT 1: 2839-6442 bp Neighborhood of RT #1 [2839, 6567] RVT_N RVT-GII GIIM HNHc DUF1380 Feature: gene Location: 2839-3096 bp Feature: gene Location: 3127-3402 bp Feature: gene Location: 3976-5643 bp Feature: domain Description: RVT_N Location: 4024-4261 bp Feature: domain Description: RVT_N Location: 4024-4261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4312-4954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431 2-4954 bp Feature: domain Description: GIIM Note: maturase Location: 5005-5239 bp Feature: domain Description: GIIM Note: maturase Location: 5005-5239 bp Feature: domain Description: HNHc Note: nucleases Location: 5449-5608 bp Feature: domain Description: HNHc Note: nucleases Location: 5449-5608 bp Feature: gene Location: 5957-6148 bp Feature: gene Location: 6145-6567 bp Feature: domain Description: DUF1380 Location: 6148-6442 bp Feature: domain Description: DUF1 380 Location: 61 48-6442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128)

Seq: NWDW01000071.1 Klebsiella pneumoniae subsp. pneumoniae strain WCHKP020111 NODE_71_length_5443_cov_9.8013, whole genome shotgun sequence (5443 bp)
Overview 1 RT 1: 961-5440 bp Neighborhood of RT #1 [961, 5440] Transposase_22 Tnp_22_dsRBD L1-EN RVT-UNC Feature: gene Location: 961-1107 bp Feature: gene Location: 1417-1977 bp Feature: domain Description: Transposase_22 Location: 1426-1717 bp Feature: domain Description: Transposase_2 2 Location: 142 6-1717 bp Feature: domain Description: Tnp_22_dsRBD Location: 1726-1918 bp Feature: domain Description: Tnp_2 2 _dsRBD Location: 172 6-1918 bp Feature: gene Location: 2041-5268 bp Feature: domain Description: L1-EN Location: 2071-2752 bp Feature: domain Description: L1-EN Location: 2 071-2 752 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3625-4282 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 362 5-42 82 bp Feature: gene Location: 5294-5440 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_22 (pfam02994), Tnp_22_dsRBD (pfam17490), L1-EN (cd09076), RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: NWDW01000089.1 Klebsiella pneumoniae subsp. pneumoniae strain WCHKP020111 NODE_89_length_1892_cov_2408.51, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 347-1442 bp Neighborhood of RT #1 [347, 1834] RVT-GII Feature: gene Location: 347-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII