myRT

myRT report for GCA_002853155.1_ASM285315v1

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Seq: NWEP01000024.1 Klebsiella pneumoniae subsp. pneumoniae strain WCHKP030295 NODE_24_length_59245_cov_89.2533, whole genome shotgun sequence (59245 bp)
Overview 1 RT 1: 55016-58727 bp Neighborhood of RT #1 [55016, 58729] PRK09951 PRK09951 RVT-UG11 umuC Feature: gene Location: 55016-55222 bp Feature: domain Description: PRK09951 Location: 55019-55169 bp Feature: domain Description: PRK09951 Location: 5501 9-551 69 bp Feature: gene Location: 55269-55682 bp Feature: domain Description: PRK09951 Location: 55272-55680 bp Feature: domain Description: PRK09951 Location: 55272-55680 bp Feature: gene Location: 55883-56791 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 56156-56612 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 561 56-5661 2 bp Feature: gene Location: 57051-57308 bp Feature: gene Location: 57464-58729 bp Feature: domain Description: umuC Location: 57467-58727 bp Feature: domain Description: umuC Location: 57467-58727 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09951 (hypothetical protein; Provisional), RVT-UG11, umuC (PRK03609)

Seq: NWEP01000026.1 Klebsiella pneumoniae subsp. pneumoniae strain WCHKP030295 NODE_26_length_39452_cov_83.893, whole genome shotgun sequence (39452 bp)
Overview 1 RT 1: 23304-28176 bp Neighborhood of RT #1 [23304, 28190] dacD RVT-GII PRK10016 YccC Feature: gene Location: 23304-24473 bp Feature: domain Description: dacD Location: 23313-24468 bp Feature: domain Description: dacD Location: 2 3313-2 4468 bp Feature: gene Location: 24818-24985 bp Feature: gene Location: 24991-26478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25396-26086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 5396-2 6086 bp Feature: gene Location: 26560-27033 bp Feature: domain Description: PRK10016 Location: 26563-27022 bp Feature: domain Description: PRK10016 Location: 2 6563-2 702 2 bp Feature: gene Location: 27117-28190 bp Feature: domain Description: YccC Location: 27138-28176 bp Feature: domain Description: YccC Location: 2 7138-2 8176 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289)

Seq: NWEP01000038.1 Klebsiella pneumoniae subsp. pneumoniae strain WCHKP030295 NODE_38_length_10544_cov_117.959, whole genome shotgun sequence (10544 bp)
Overview 1 RT 1: 5331-9702 bp Neighborhood of RT #1 [5331, 9818] InsE PHA02517 RVT-GII GIIM PHA02517 COG3547 Feature: gene Location: 5331-5633 bp Feature: domain Description: InsE Location: 5340-5622 bp Feature: domain Description: InsE Location: 53 40-5622 bp Feature: gene Location: 5660-6085 bp Feature: domain Description: PHA02517 Location: 5684-6020 bp Feature: domain Description: PHA02517 Location: 5684-6020 bp Feature: gene Location: 6677-8200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6950-7682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6950-7682 bp Feature: domain Description: GIIM Note: maturase Location: 7757-7955 bp Feature: domain Description: GIIM Note: maturase Location: 7757-7955 bp Feature: gene Location: 8365-8523 bp Feature: domain Description: PHA02517 Location: 8368-8488 bp Feature: domain Description: PHA02517 Location: 83 68-8488 bp Feature: gene Location: 8742-9818 bp Feature: domain Description: COG3547 Location: 8781-9702 bp Feature: domain Description: COG3 547 Location: 8781-9702 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: NWEP01000068.1 Klebsiella pneumoniae subsp. pneumoniae strain WCHKP030295 NODE_68_length_1916_cov_233.541, whole genome shotgun sequence (1916 bp)
Overview 1 RT 1: 62-1833 bp Neighborhood of RT #1 [62, 1833] RVT-GII Feature: gene Location: 62-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 64 -1154 bp Feature: gene Location: 1600-1833 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII