myRT

myRT report for GCA_002853515.1_ASM285351v1

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Seq: NWFJ01000013.1 Klebsiella pneumoniae subsp. pneumoniae strain SCKP020071 NODE_13_length_120249_cov_182.022, whole genome shotgun sequence (120249 bp)
Overview 1 RT 1: 74168-82860 bp Neighborhood of RT #1 [74168, 82889] Beta_protein IncA RVT-UG5 PRK04247 RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Feature: gene Location: 74168-75196 bp Feature: domain Description: Beta_protein Location: 74186-75176 bp Feature: domain Description: Beta_protein Location: 741 86-751 76 bp Feature: gene Location: 75741-76415 bp Feature: domain Description: IncA Location: 76032-76374 bp Feature: domain Description: IncA Location: 76032-76374 bp Feature: gene Location: 76863-79880 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 77361-77856 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 77361 -77856 bp Feature: gene Location: 80060-81160 bp Feature: domain Description: PRK04247 Location: 80123-80354 bp Feature: domain Description: PRK04247 Location: 801 23-80354 bp Feature: gene Location: 81171-82889 bp Feature: domain Description: RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Location: 81498-82032 bp Feature: domain Description: RMtype1 _S_Ppo21 ORF8840P_TRD1 -CR1 _like Location: 81 498-82032 bp Feature: domain Description: RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Location: 82482-82860 bp Feature: domain Description: RMtype1 _S_Ppo21 ORF8840P_TRD1 -CR1 _like Location: 82482-82860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Beta_protein (pfam14350), IncA, RVT-UG5, PRK04247 (endonuclease NucS), RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like (cd17293)

Seq: NWFJ01000025.1 Klebsiella pneumoniae subsp. pneumoniae strain SCKP020071 NODE_25_length_27522_cov_248.14, whole genome shotgun sequence (27522 bp)
Overview 1 RT 1: 12231-15479 bp Neighborhood of RT #1 [12231, 15493] RVT-GII PRK10276 Feature: gene Location: 12231-12452 bp Feature: gene Location: 12714-12944 bp Feature: gene Location: 13178-14665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13583-14273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13583-142 73 bp Feature: gene Location: 14671-14838 bp Feature: gene Location: 15068-15493 bp Feature: domain Description: PRK10276 Location: 15071-15479 bp Feature: domain Description: PRK102 76 Location: 15071-15479 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: NWFJ01000003.1 Klebsiella pneumoniae subsp. pneumoniae strain SCKP020071 NODE_3_length_466368_cov_162.511, whole genome shotgun sequence (466368 bp)
Overview 1 RT 1: 248498-252627 bp Neighborhood of RT #1 [248498, 252632] PRK09951 PRK09951 RVT-UG11 umuC PRK10276 Feature: gene Location: 248498-248704 bp Feature: domain Description: PRK09951 Location: 248501-248651 bp Feature: domain Description: PRK09951 Location: 248501-248651 bp Feature: gene Location: 248751-249164 bp Feature: domain Description: PRK09951 Location: 248754-249162 bp Feature: domain Description: PRK09951 Location: 248754-249162 bp Feature: gene Location: 249365-250273 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 249638-250094 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 24963 8-250094 bp Feature: gene Location: 250946-252211 bp Feature: domain Description: umuC Location: 250949-252209 bp Feature: domain Description: umuC Location: 250949-252209 bp Feature: gene Location: 252213-252632 bp Feature: domain Description: PRK10276 Location: 252216-252627 bp Feature: domain Description: PRK10276 Location: 252216-252627 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09951 (hypothetical protein; Provisional), RVT-UG11, umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)