myRT

myRT report for GCA_002853735.1_ASM285373v1

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Seq: NCPZ01000046.1 Klebsiella pneumoniae strain COL-Kpn125 contig_31, whole genome shotgun sequence (11744 bp)
Overview 1 RT 1: 3896-6967 bp Neighborhood of RT #1 [3896, 6981] DDE_Tnp_ISL3 RVT-GII zf-ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 AfaD-like Feature: gene Location: 3896-4030 bp Feature: gene Location: 4165-4527 bp Feature: gene Location: 4717-5397 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 4723-4879 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 4723-4879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5257-5395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5257-5395 bp Feature: gene Location: 5437-6414 bp Feature: domain Description: zf-ISL3 Location: 5569-5695 bp Feature: domain Description: zf-ISL3 Location: 5569-5695 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 5713-5860 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 571 3-5860 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 5911-6385 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 591 1 -6385 bp Feature: gene Location: 6532-6981 bp Feature: domain Description: AfaD-like Location: 6628-6967 bp Feature: domain Description: AfaD-like Location: 6628-6967 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_ISL3 (pfam01610), RVT-GII, zf-ISL3 (pfam14690), HTH_Tnp_ISL3 (pfam13542), AfaD-like (cd18776)

Seq: NCPZ01000014.1 Klebsiella pneumoniae strain COL-Kpn125 contig_8, whole genome shotgun sequence (120357 bp)
Overview 1 RT 1: 33922-43622 bp Neighborhood of RT #1 [33922, 43831] tape_meas_TP901 COG5283 COG3499 RVT-UG15 COG5301 Tail_P2_I YjdB LRR_3 LRR_3 LRR_3 Feature: gene Location: 33922-36897 bp Feature: domain Description: tape_meas_TP901 Location: 34489-35539 bp Feature: domain Description: tape_meas_TP901 Location: 34489-35539 bp Feature: domain Description: COG5283 Location: 35896-36301 bp Feature: domain Description: COG52 83 Location: 35896-36301 bp Feature: gene Location: 36912-37403 bp Feature: domain Description: COG3499 Location: 36915-37347 bp Feature: domain Description: COG3499 Location: 36915-37347 bp Feature: gene Location: 38017-39306 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 38104-38527 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 38104-3852 7 bp Feature: gene Location: 39499-40596 bp Feature: domain Description: COG5301 Location: 39520-39985 bp Feature: domain Description: COG5301 Location: 3952 0-39985 bp Feature: gene Location: 40805-43831 bp Feature: domain Description: Tail_P2_I Location: 40835-41255 bp Feature: domain Description: Tail_P2 _I Location: 40835-412 55 bp Feature: domain Description: YjdB Location: 41384-41621 bp Feature: domain Description: YjdB Location: 41384-4162 1 bp Feature: domain Description: LRR_3 Location: 41987-42302 bp Feature: domain Description: LRR_3 Location: 41987-42 302 bp Feature: domain Description: LRR_3 Location: 42554-42929 bp Feature: domain Description: LRR_3 Location: 42 554-42 92 9 bp Feature: domain Description: LRR_3 Location: 43274-43622 bp Feature: domain Description: LRR_3 Location: 432 74-4362 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT tape_meas_TP901 (TIGR01760), COG5283 (Phage-related tail protein ), COG3499 (Phage protein U ), RVT-UG15, COG5301 (Phage-related tail fibre protein ), Tail_P2_I (pfam09684), YjdB (COG5492), LRR_3 (sd00036)