myRT

myRT report for GCA_002853895.1_ASM285389v1

Download annotations/find similar RTs

Seq: NCPR01000030.1 Klebsiella pneumoniae strain COL-Kpn117 contig_13, whole genome shotgun sequence (137303 bp)
Overview 1 RT 1: 36188-40749 bp Neighborhood of RT #1 [36188, 40856] Zn_Tnp_IS91 Y2_Tnp RVT-GII HTH_Tnp_1 Acetyltransf_8 Feature: gene Location: 36188-37717 bp Feature: domain Description: Zn_Tnp_IS91 Location: 36275-36557 bp Feature: domain Description: Zn_Tnp_IS91 Location: 36275-36557 bp Feature: domain Description: Y2_Tnp Location: 36692-37364 bp Feature: domain Description: Y2_Tnp Location: 36692-37364 bp Feature: gene Location: 37907-38119 bp Feature: gene Location: 38194-39603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38521-39211 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38521 -3921 1 bp Feature: gene Location: 40004-40225 bp Feature: domain Description: HTH_Tnp_1 Location: 40016-40139 bp Feature: domain Description: HTH_Tnp_1 Location: 4001 6-401 39 bp Feature: gene Location: 40284-40856 bp Feature: domain Description: Acetyltransf_8 Location: 40329-40749 bp Feature: domain Description: Acetyltransf_8 Location: 40329-40749 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Zn_Tnp_IS91 (pfam14319), Y2_Tnp (pfam04986), RVT-GII, HTH_Tnp_1 (pfam01527), Acetyltransf_8 (pfam13523)

Seq: NCPR01000047.1 Klebsiella pneumoniae strain COL-Kpn117 contig_23_1, whole genome shotgun sequence (44790 bp)
Overview 1 RT 1: 9282-12466 bp Neighborhood of RT #1 [9282, 12466] PRK10276 RVT-GII Feature: gene Location: 9282-9707 bp Feature: domain Description: PRK10276 Location: 9285-9693 bp Feature: domain Description: PRK102 76 Location: 92 85-9693 bp Feature: gene Location: 9825-10058 bp Feature: gene Location: 10109-11620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10514-11228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10514-112 2 8 bp Feature: gene Location: 11506-12084 bp Feature: gene Location: 12143-12466 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: NCPR01000059.1 Klebsiella pneumoniae strain COL-Kpn117 contig_33, whole genome shotgun sequence (7536 bp)
Overview 1 RT 1: 4566-7181 bp Neighborhood of RT #1 [4566, 7426] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 4566-4841 bp Feature: domain Description: InsE Location: 4578-4827 bp Feature: domain Description: InsE Location: 4578-4827 bp Feature: gene Location: 4838-5311 bp Feature: domain Description: PHA02517 Location: 4928-5246 bp Feature: domain Description: PHA02517 Location: 4928-5246 bp Feature: gene Location: 5903-7426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6176-6908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6176-6908 bp Feature: domain Description: GIIM Note: maturase Location: 6983-7181 bp Feature: domain Description: GIIM Note: maturase Location: 6983 -7181 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)