myRT

myRT report for GCA_002854115.1_ASM285411v1

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Seq: NCPF01000037.1 Klebsiella pneumoniae strain COL-Kpn105 contig_24, whole genome shotgun sequence (37322 bp)
Overview 1 RT 1: 3-5754 bp Neighborhood of RT #1 [3, 5756] FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 3-2255 bp Feature: domain Description: FimD Location: 33-2244 bp Feature: domain Description: FimD Location: 33-2244 bp Feature: gene Location: 2255-4333 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2663-3107 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2663-31 07 bp Feature: gene Location: 4390-4830 bp Feature: domain Description: Integrase_1 Location: 4396-4612 bp Feature: domain Description: Integrase_1 Location: 4396-461 2 bp Feature: gene Location: 5091-5756 bp Feature: domain Description: INT_P4_C Location: 5196-5754 bp Feature: domain Description: INT_P4_C Location: 51 96-5754 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: NCPF01000084.1 Klebsiella pneumoniae strain COL-Kpn105 contig_64, whole genome shotgun sequence (1923 bp)
Overview 1 RT 1: 61-1832 bp Neighborhood of RT #1 [61, 1832] RVT-GII Feature: gene Location: 61-1545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463-1153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463-1153 bp Feature: gene Location: 1599-1832 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII