myRT

myRT report for GCA_002854145.1_ASM285414v1

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Seq: NCPE01000064.1 Klebsiella pneumoniae strain COL-Kpn104 contig_52, whole genome shotgun sequence (37322 bp)
Overview 1 RT 1: 31567-37309 bp Neighborhood of RT #1 [31567, 37320] INT_P4_C Integrase_1 RVT-UG4 FimD Feature: gene Location: 31567-32232 bp Feature: domain Description: INT_P4_C Location: 31672-32230 bp Feature: domain Description: INT_P4_C Location: 31 672-32230 bp Feature: gene Location: 32493-32933 bp Feature: domain Description: Integrase_1 Location: 32499-32715 bp Feature: domain Description: Integrase_1 Location: 32499-3271 5 bp Feature: gene Location: 32990-35068 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33398-33842 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33398-33842 bp Feature: gene Location: 35068-37320 bp Feature: domain Description: FimD Location: 35098-37309 bp Feature: domain Description: FimD Location: 35098-37309 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188)

Seq: NCPE01000068.1 Klebsiella pneumoniae strain COL-Kpn104 contig_56, whole genome shotgun sequence (1923 bp)
Overview 1 RT 1: 61-1832 bp Neighborhood of RT #1 [61, 1832] RVT-GII Feature: gene Location: 61-1545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463-1153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463-1153 bp Feature: gene Location: 1599-1832 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII