myRT

myRT report for GCA_002854355.1_ASM285435v1

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Seq: NCOG01000034.1 Klebsiella pneumoniae strain COL-Kpn80 contig_27, whole genome shotgun sequence (1973 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 1970] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-1970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1 662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1 737-1 935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NCOG01000004.1 Klebsiella pneumoniae strain COL-Kpn80 contig_3, whole genome shotgun sequence (607040 bp)
Overview 1 RT 1: 578460-581534 bp Neighborhood of RT #1 [578460, 581539] PRK09678 RVT-UG11 SmpB PRK10724 Feature: gene Location: 578460-578678 bp Feature: domain Description: PRK09678 Location: 578463-578661 bp Feature: domain Description: PRK09678 Location: 578463-578661 bp Feature: gene Location: 578925-579113 bp Feature: gene Location: 579556-579855 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 579559-579670 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 579559-579670 bp Feature: gene Location: 580470-580952 bp Feature: domain Description: SmpB Location: 580500-580944 bp Feature: domain Description: SmpB Location: 580500-580944 bp Feature: gene Location: 581102-581539 bp Feature: domain Description: PRK10724 Location: 581105-581534 bp Feature: domain Description: PRK1072 4 Location: 581105-581534 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)