myRT

myRT report for GCA_002854515.1_ASM285451v1

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Seq: NCNQ01000024.1 Klebsiella pneumoniae strain COL-Kpn64 contig_13, whole genome shotgun sequence (239452 bp)
Overview 1 RT 1: 32085-36968 bp Neighborhood of RT #1 [32085, 36970] umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 32085-33350 bp Feature: domain Description: umuC Location: 32088-33348 bp Feature: domain Description: umuC Location: 32088-33348 bp Feature: gene Location: 33575-33763 bp Feature: gene Location: 34023-34931 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 34296-34752 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 34296-34752 bp Feature: gene Location: 35132-35800 bp Feature: domain Description: PRK09951 Location: 35135-35798 bp Feature: domain Description: PRK09951 Location: 351 35-35798 bp Feature: gene Location: 36005-36970 bp Feature: domain Description: PRK15110 Location: 36008-36968 bp Feature: domain Description: PRK1 51 1 0 Location: 36008-36968 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)

Seq: NCNQ01000050.1 Klebsiella pneumoniae strain COL-Kpn64 contig_29, whole genome shotgun sequence (10394 bp)
Overview 1 RT 1: 5239-9610 bp Neighborhood of RT #1 [5239, 9726] InsE PHA02517 RVT-GII GIIM PHA02517 COG3547 Feature: gene Location: 5239-5541 bp Feature: domain Description: InsE Location: 5248-5530 bp Feature: domain Description: InsE Location: 52 48-5530 bp Feature: gene Location: 5568-5993 bp Feature: domain Description: PHA02517 Location: 5592-5928 bp Feature: domain Description: PHA02 517 Location: 5592 -592 8 bp Feature: gene Location: 6585-8108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6858-7590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6858-7590 bp Feature: domain Description: GIIM Note: maturase Location: 7665-7863 bp Feature: domain Description: GIIM Note: maturase Location: 7665-7863 bp Feature: gene Location: 8273-8431 bp Feature: domain Description: PHA02517 Location: 8276-8396 bp Feature: domain Description: PHA02 517 Location: 82 76-8396 bp Feature: gene Location: 8650-9726 bp Feature: domain Description: COG3547 Location: 8689-9610 bp Feature: domain Description: COG3547 Location: 8689-9610 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: NCNQ01000062.1 Klebsiella pneumoniae strain COL-Kpn64 contig_41, whole genome shotgun sequence (65074 bp)
Overview 1 RT 1: 22060-32291 bp Neighborhood of RT #1 [22060, 32833] TraC-F-type DsbA_DsbC_DsbG RVT-GII GIIM Big_3_3 Big_3_3 PKD Feature: gene Location: 22060-24507 bp Feature: domain Description: TraC-F-type Location: 22132-24487 bp Feature: domain Description: TraC-F-type Location: 2213 2-24487 bp Feature: gene Location: 24504-25211 bp Feature: domain Description: DsbA_DsbC_DsbG Location: 24606-25197 bp Feature: domain Description: DsbA_DsbC_DsbG Location: 24606-25197 bp Feature: gene Location: 25385-26767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25700-26318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25700-263 18 bp Feature: domain Description: GIIM Note: maturase Location: 26369-26576 bp Feature: domain Description: GIIM Note: maturase Location: 263 69-26576 bp Feature: gene Location: 26895-27032 bp Feature: gene Location: 27290-32833 bp Feature: domain Description: Big_3_3 Location: 27629-28028 bp Feature: domain Description: Big_3 _3 Location: 27629-28028 bp Feature: domain Description: Big_3_3 Location: 28970-29438 bp Feature: domain Description: Big_3 _3 Location: 28970-2943 8 bp Feature: domain Description: PKD Location: 32120-32291 bp Feature: domain Description: PKD Location: 3 2120-3 2291 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraC-F-type (TIGR02746), DsbA_DsbC_DsbG (cd03020), RVT-GII, GIIM (pfam08388), Big_3_3 (pfam13750), PKD (smart00089)