myRT

myRT report for GCA_002854575.1_ASM285457v1

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Seq: NCNK01000041.1 Klebsiella pneumoniae strain COL-Kpn58 contig_19, whole genome shotgun sequence (43045 bp)
Overview 1 RT 1: 25819-29003 bp Neighborhood of RT #1 [25819, 29003] PRK10276 RVT-GII Feature: gene Location: 25819-26244 bp Feature: domain Description: PRK10276 Location: 25822-26230 bp Feature: domain Description: PRK1 0276 Location: 25822-26230 bp Feature: gene Location: 26362-26595 bp Feature: gene Location: 26646-28157 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27051-27765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27051 -27765 bp Feature: gene Location: 28391-28621 bp Feature: gene Location: 28680-29003 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: NCNK01000064.1 Klebsiella pneumoniae strain COL-Kpn58 contig_30_0, whole genome shotgun sequence (142070 bp)
Overview 1 RT 1: 648-7501 bp Neighborhood of RT #1 [648, 7518] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 648-1313 bp Feature: domain Description: INT_P4_C Location: 753-1311 bp Feature: domain Description: INT_P4_C Location: 753-1311 bp Feature: gene Location: 1574-2014 bp Feature: domain Description: Integrase_1 Location: 1580-1796 bp Feature: domain Description: Integrase_1 Location: 1580-1796 bp Feature: gene Location: 2071-4149 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2479-2923 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 479-2 92 3 bp Feature: gene Location: 4149-6758 bp Feature: domain Description: FimD Location: 4206-6747 bp Feature: domain Description: FimD Location: 42 06-6747 bp Feature: gene Location: 6790-7518 bp Feature: domain Description: FimC Location: 6838-7501 bp Feature: domain Description: FimC Location: 6838-7501 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)