myRT

myRT report for GCA_002854715.1_ASM285471v1

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Seq: NCNH01000048.1 Klebsiella pneumoniae strain COL-Kpn55 contig_40, whole genome shotgun sequence (4653 bp)
Overview 1 RT 1: 668-4540 bp Neighborhood of RT #1 [668, 4540] COG3547 RVT-GII GIIM Feature: gene Location: 668-1744 bp Feature: domain Description: COG3547 Location: 707-1628 bp Feature: domain Description: COG3547 Location: 707-1 628 bp Feature: gene Location: 1993-2199 bp Feature: gene Location: 2286-3809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2559-3291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2559-3291 bp Feature: domain Description: GIIM Note: maturase Location: 3366-3564 bp Feature: domain Description: GIIM Note: maturase Location: 3366-3564 bp Feature: gene Location: 4103-4540 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: NCNH01000007.1 Klebsiella pneumoniae strain COL-Kpn55 contig_5_0, whole genome shotgun sequence (151615 bp)
Overview 1 RT 1: 25505-28567 bp Neighborhood of RT #1 [25505, 28584] PRK10724 SmpB RVT-UG11 PRK09678 Feature: gene Location: 25505-25981 bp Feature: domain Description: PRK10724 Location: 25511-25976 bp Feature: domain Description: PRK1072 4 Location: 2 5511-2 5976 bp Feature: gene Location: 26092-26574 bp Feature: domain Description: SmpB Location: 26122-26566 bp Feature: domain Description: SmpB Location: 2 612 2 -2 6566 bp Feature: gene Location: 27189-27962 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27324-27777 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2 732 4-2 7777 bp Feature: gene Location: 27931-28119 bp Feature: gene Location: 28366-28584 bp Feature: domain Description: PRK09678 Location: 28369-28567 bp Feature: domain Description: PRK09678 Location: 2 8369-2 8567 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10724 (type II toxin-antitoxin system RatA family toxin), SmpB (pfam01668), RVT-UG11, PRK09678 (DNA-binding transcriptional regulator; Provisional)