myRT

myRT report for GCA_002855255.1_ASM285525v1

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Seq: NCNO01000014.1 Klebsiella pneumoniae strain COL-Kpn62 contig_10_1, whole genome shotgun sequence (42989 bp)
Overview 1 RT 1: 25819-29003 bp Neighborhood of RT #1 [25819, 29003] PRK10276 RVT-GII Feature: gene Location: 25819-26244 bp Feature: domain Description: PRK10276 Location: 25822-26230 bp Feature: domain Description: PRK1 0276 Location: 25822-26230 bp Feature: gene Location: 26362-26595 bp Feature: gene Location: 26646-28157 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27051-27765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27051 -27765 bp Feature: gene Location: 28391-28621 bp Feature: gene Location: 28680-29003 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: NCNO01000002.1 Klebsiella pneumoniae strain COL-Kpn62 contig_2_0, whole genome shotgun sequence (174101 bp)
Overview 1 RT 1: 32678-39531 bp Neighborhood of RT #1 [32678, 39548] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32678-33343 bp Feature: domain Description: INT_P4_C Location: 32783-33341 bp Feature: domain Description: INT_P4_C Location: 32 783-33341 bp Feature: gene Location: 33604-34044 bp Feature: domain Description: Integrase_1 Location: 33610-33826 bp Feature: domain Description: Integrase_1 Location: 33610-3382 6 bp Feature: gene Location: 34101-36179 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 34509-34953 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 34509-34953 bp Feature: gene Location: 36179-38788 bp Feature: domain Description: FimD Location: 36236-38777 bp Feature: domain Description: FimD Location: 362 36-38777 bp Feature: gene Location: 38820-39548 bp Feature: domain Description: FimC Location: 38868-39531 bp Feature: domain Description: FimC Location: 38868-39531 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)