myRT

myRT report for GCA_002855615.1_ASM285561v1

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Seq: NBST01000069.1 Escherichia coli strain Ec-HUCA 7 NODE_25_length_97849_cov_15.068258, whole genome shotgun sequence (97941 bp)
Overview 1 RT 1: 91004-94877 bp Neighborhood of RT #1 [91004, 95248] SLATT_5 RVT-UG17 Caudo_TAP Macro_Appr_pase Feature: gene Location: 91004-91180 bp Feature: gene Location: 91588-92292 bp Feature: domain Description: SLATT_5 Location: 91750-92260 bp Feature: domain Description: SLATT_5 Location: 91 750-92260 bp Feature: gene Location: 92270-93640 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 92498-93104 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 92498-931 04 bp Feature: gene Location: 93753-94337 bp Feature: domain Description: Caudo_TAP Location: 93969-94326 bp Feature: domain Description: Caudo_TAP Location: 93969-94326 bp Feature: gene Location: 94346-95248 bp Feature: domain Description: Macro_Appr_pase Location: 94364-94877 bp Feature: domain Description: Macro_Appr_pase Location: 94364-94877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, Caudo_TAP (pfam02413), Macro_Appr_pase (cd02900)

Seq: NBST01000077.1 Escherichia coli strain Ec-HUCA 7 NODE_58_length_206191_cov_15.037388, whole genome shotgun sequence (206283 bp)
Overview 1 RT 1: 100752-104645 bp 2 RT 2: 123561-127947 bp Neighborhood of RT #1 [100752, 104645] InsE PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [123561, 127947] RVT-Retrons Feature: gene Location: 100752-101036 bp Feature: domain Description: InsE Location: 100764-101025 bp Feature: domain Description: InsE Location: 100764-10102 5 bp Feature: gene Location: 101084-101503 bp Feature: domain Description: PHA02517 Location: 101099-101438 bp Feature: domain Description: PHA02 517 Location: 101099-101438 bp Feature: gene Location: 102095-103618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102368-103100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 368-103100 bp Feature: domain Description: GIIM Note: maturase Location: 103175-103373 bp Feature: domain Description: GIIM Note: maturase Location: 103175-103373 bp Feature: gene Location: 103741-104157 bp Feature: domain Description: PHA02517 Location: 103744-104149 bp Feature: domain Description: PHA02 517 Location: 103744-104149 bp Feature: gene Location: 104475-104645 bp Feature: gene Location: 123561-124700 bp Feature: gene Location: 124746-124913 bp Feature: gene Location: 124935-126707 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 125094-125712 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 5094-12 5712 bp Feature: gene Location: 127263-127502 bp Feature: gene Location: 127717-127947 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), RVT-Retrons