myRT

myRT report for GCA_002855735.1_ASM285573v1

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Seq: NBSY01000020.1 Escherichia coli strain Ec-HUCA 2 NODE_111_length_222221_cov_20.592716, whole genome shotgun sequence (222309 bp)
Overview 1 RT 1: 217249-220919 bp Neighborhood of RT #1 [217249, 220966] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT-GII GIIM DDE_Tnp_IS66_C IrmA Feature: gene Location: 217249-218688 bp Feature: domain Description: LZ_Tnp_IS66 Location: 217387-217612 bp Feature: domain Description: LZ_Tnp_IS66 Location: 21 7387-21 761 2 bp Feature: domain Description: zf-IS66 Location: 217633-217765 bp Feature: domain Description: zf-IS66 Location: 21 7633-21 7765 bp Feature: domain Description: DDE_Tnp_IS66 Location: 217810-218647 bp Feature: domain Description: DDE_Tnp_IS66 Location: 21 781 0-21 8647 bp Feature: gene Location: 218896-219057 bp Feature: gene Location: 219150-220382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 219351-220005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 9351 -220005 bp Feature: domain Description: GIIM Note: maturase Location: 220083-220305 bp Feature: domain Description: GIIM Note: maturase Location: 220083-220305 bp Feature: gene Location: 220498-220644 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 220510-220621 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 22051 0-220621 bp Feature: gene Location: 220757-220966 bp Feature: domain Description: IrmA Location: 220760-220919 bp Feature: domain Description: IrmA Location: 220760-22091 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), IrmA (pfam18673)