myRT

myRT report for GCA_002857035.1_ASM285703v1

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Seq: PIDN01000189.1 Klebsiella pneumoniae strain D37 NODE_189_length_8266_cov_4.4041, whole genome shotgun sequence (8266 bp)
Overview 1 RT 1: 1735-5005 bp Neighborhood of RT #1 [1735, 5019] RVT-GII PRK10276 Feature: gene Location: 1735-1950 bp Feature: gene Location: 2217-2795 bp Feature: gene Location: 2681-4192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3086-3800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3086-3800 bp Feature: gene Location: 4243-4476 bp Feature: gene Location: 4594-5019 bp Feature: domain Description: PRK10276 Location: 4597-5005 bp Feature: domain Description: PRK1 0276 Location: 4597-5005 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: PIDN01000026.1 Klebsiella pneumoniae strain D37 NODE_26_length_22444_cov_4.06421, whole genome shotgun sequence (22444 bp)
Overview 1 RT 1: 14937-21805 bp Neighborhood of RT #1 [14937, 21807] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 14937-15665 bp Feature: domain Description: FimC Location: 14970-15648 bp Feature: domain Description: FimC Location: 14970-15648 bp Feature: gene Location: 15697-18306 bp Feature: domain Description: FimD Location: 15754-18295 bp Feature: domain Description: FimD Location: 15754-182 95 bp Feature: gene Location: 18306-20384 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 18714-19158 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 18714-19158 bp Feature: gene Location: 20441-20881 bp Feature: domain Description: Integrase_1 Location: 20447-20663 bp Feature: domain Description: Integrase_1 Location: 2 0447-2 0663 bp Feature: gene Location: 21142-21807 bp Feature: domain Description: INT_P4_C Location: 21247-21805 bp Feature: domain Description: INT_P4_C Location: 2 12 47-2 1805 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)