myRT

myRT report for GCA_002860225.1_ASM286022v1

Download annotations/find similar RTs

Seq: PGVC01000017.1 Bacillus sp. V33-4 contig_17, whole genome shotgun sequence (32146 bp)
Overview 1 RT 1: 19726-24142 bp Neighborhood of RT #1 [19726, 24159] RadC RVT-GII Intron_maturas2 HNHc PRK00024 PRK13927 Feature: gene Location: 19726-20220 bp Feature: domain Description: RadC Location: 19747-20215 bp Feature: domain Description: RadC Location: 1 9747-2021 5 bp Feature: gene Location: 20486-20656 bp Feature: gene Location: 20774-22585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21038-21869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 038-21 869 bp Feature: domain Description: Intron_maturas2 Location: 21950-22316 bp Feature: domain Description: Intron_maturas2 Location: 21 950-2231 6 bp Feature: domain Description: HNHc Note: nucleases Location: 22409-22556 bp Feature: domain Description: HNHc Note: nucleases Location: 22409-22556 bp Feature: gene Location: 22731-22892 bp Feature: domain Description: PRK00024 Location: 22734-22887 bp Feature: domain Description: PRK00024 Location: 22734-22887 bp Feature: gene Location: 23137-24159 bp Feature: domain Description: PRK13927 Location: 23149-24142 bp Feature: domain Description: PRK1 3927 Location: 231 49-241 42 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RadC (pfam04002), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK00024 (DNA repair protein RadC), PRK13927 (rod shape-determining protein MreB; Provisional)

Seq: PGVC01000057.1 Bacillus sp. V33-4 contig_58, whole genome shotgun sequence (1209 bp)
Overview 1 RT 1: 3-939 bp Neighborhood of RT #1 [3, 1151] RVT-GII Feature: gene Location: 3-1151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 309-939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 309-939 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PGVC01000060.1 Bacillus sp. V33-4 contig_61, whole genome shotgun sequence (2060 bp)
Overview 1 RT 1: 3-1820 bp Neighborhood of RT #1 [3, 1978] RVT-GII GIIM Feature: gene Location: 3-206 bp Feature: gene Location: 653-1978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 920-1541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 920-1541 bp Feature: domain Description: GIIM Note: maturase Location: 1586-1820 bp Feature: domain Description: GIIM Note: maturase Location: 1586-1820 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)