myRT

myRT report for GCA_002860325.1_ASM286032v1

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Seq: PKOJ01000001.1 Amylibacter cionae strain m18 A-m18_1, whole genome shotgun sequence (1213590 bp)
Overview 1 RT 1: 1141273-1148644 bp Neighborhood of RT #1 [1141273, 1148697] PRK13915 PRK00192 RVT-UG5 INT_Lambda_C Feature: gene Location: 1141273-1142490 bp Feature: domain Description: PRK13915 Location: 1141627-1142200 bp Feature: domain Description: PRK1 391 5 Location: 1 1 41 627-1 1 42200 bp Feature: gene Location: 1142501-1143286 bp Feature: domain Description: PRK00192 Location: 1142516-1143272 bp Feature: domain Description: PRK001 92 Location: 1 1 4251 6-1 1 43272 bp Feature: gene Location: 1143772-1146756 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1144261-1144735 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 1 44261 -1 1 44735 bp Feature: gene Location: 1147476-1147700 bp Feature: gene Location: 1147687-1148697 bp Feature: domain Description: INT_Lambda_C Location: 1148224-1148644 bp Feature: domain Description: INT_Lambda_C Location: 1 1 48224-1 1 48644 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13915 (putative glucosyl-3-phosphoglycerate synthase; Provisional), PRK00192 (mannosyl-3-phosphoglycerate phosphatase; Reviewed), RVT-UG5, INT_Lambda_C (cd00800)

Seq: PKOJ01000012.1 Amylibacter cionae strain m18 A-m18_12, whole genome shotgun sequence (37974 bp)
Overview 1 RT 1: 1687-5699 bp Neighborhood of RT #1 [1687, 5959] RVT-UG7 Rep_trans Feature: gene Location: 1687-1875 bp Feature: gene Location: 1967-2611 bp Feature: gene Location: 2668-4305 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 3073-3496 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 3073-3496 bp Feature: gene Location: 4340-4483 bp Feature: gene Location: 4811-5959 bp Feature: domain Description: Rep_trans Location: 5189-5699 bp Feature: domain Description: Rep_trans Location: 5189-5699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, Rep_trans (pfam02486)

Seq: PKOJ01000014.1 Amylibacter cionae strain m18 A-m18_14, whole genome shotgun sequence (16260 bp)
Overview 1 RT 1: 3-4343 bp Neighborhood of RT #1 [3, 4348] group_II_RT_mat RVT-UG13 COG4655 DUF11 Feature: gene Location: 3-893 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 150-291 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 150-291 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 468-786 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 468-786 bp Feature: gene Location: 920-1207 bp Feature: gene Location: 1226-4348 bp Feature: domain Description: COG4655 Location: 1451-2738 bp Feature: domain Description: COG4655 Location: 1451-273 8 bp Feature: domain Description: DUF11 Location: 4037-4343 bp Feature: domain Description: DUF11 Location: 403 7-43 43 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-UG13, COG4655 (Uncharacterized membrane protein ), DUF11 (pfam01345)

Seq: PKOJ01000007.1 Amylibacter cionae strain m18 A-m18_7, whole genome shotgun sequence (282994 bp)
Overview 1 RT 1: 240400-246027 bp Neighborhood of RT #1 [240400, 246029] COG3894 RVT-UG2 FAS1 Feature: gene Location: 240400-241086 bp Feature: gene Location: 241209-243269 bp Feature: domain Description: COG3894 Location: 241227-243195 bp Feature: domain Description: COG3894 Location: 24 1227-24 3195 bp Feature: gene Location: 243749-245122 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 244028-244805 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 24 4 028-24 4 805 bp Feature: gene Location: 245285-245434 bp Feature: gene Location: 245463-246029 bp Feature: domain Description: FAS1 Location: 245532-246027 bp Feature: domain Description: FAS1 Location: 24 5532-24 6027 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3894 (Uncharacterized 2Fe-2 and 4Fe-4S clusters-containing protein, contains DUF4445 domain ), RVT-UG2, FAS1 (smart00554)